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Detailed information on CNT3052251


BLAST search results

BLAST vs Swiss-Prot:
sp|P60282|RPOB_AMBTC, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523685Amborella trichopodaSetaria italica4.3671.1185.55256forward
CNT30549210Amborella trichopodaIpomoea triloba10.3151.1881.32605forward
CNT30617716Amborella trichopodaSesamum indicum3.0342.1883.71178forward
CNT30200949Amborella trichopodaPisum sativum2.7673.6488.27162forward
CNT30187493Amborella trichopodaSecale cereale3.2441.8591.58190forward
CNT30220178Amborella trichopodaHordeum vulgare10.3924.6988.52610forward
CNT30401101Amborella trichopodaTriticum turgidum9.3445.0387.96548forward
CNT30439579Amborella trichopodaAegilops tauschii3.2968.9392.75193forward
CNT30664530Amborella trichopodaTriticum dicoccoides1.5224.8697.7589forward
CNT30228621Amborella trichopodaAnanas comosus2.5235.5894.59148reverse complement
CNT3067891Amborella trichopodaLeersia perrieri7.3469.5280.05431forward
CNT30717691Amborella trichopodaMalus domestica golden3.8841.1685.96228forward
CNT30680154Amborella trichopodaTriticum urartu2.5743.2794.04151forward
CNT30100050Amborella trichopodaOryza rufipogon5.6675.4588.25332reverse complement
CNT30495778Amborella trichopodaDigitaria exilis4.6965.7988.73275forward
CNT30557320Amborella trichopodaPanicum hallii2.330.4192.59135forward
CNT30335348Amborella trichopodaCynara cardunculus2.3938.6788.57140forward

Expression of CNT3052251

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDVQRLTLSENQVGFEGSLISKTSMLVRSGPWSSVSGLPADKISEIDQPAGLVWLFLSIEKESQLSGE*

>peptide 2 (30 aa)
MWAARWPDSAWSVRDSNKDYCYPRIYIYLS*

>peptide 3 (29 aa)
MEAGGLFGPVFCVVGDLSNAYSVVPTWPH*

>peptide 4 (29 aa)
MLLERHISNIEQFLFPTINEKIIAPPDPL*

>peptide 5 (33 aa)
MLDICCPGVYPGVLLWLICHPYILGPVPCPPYG*

>peptide 6 (32 aa)
MYCSKVYQYSISSSYFVDQSFLIHIFVEKSLL*

>peptide 7 (32 aa)
MDSRDWDFAPPLDRDPDEPHPLMVEPLPLVGD*

>peptide 8 (31 aa)
MLRQGKPKESIVSSISADIQLSRGGGGGFWS*

>peptide 9 (63 aa)
MFPINTVSQRRFLASKRLLAQRTRSDPFLMTQSAMAFDAPLLAKRSVERTMNKVHFVLQSFIR*

>peptide 10 (65 aa)
MRNMTNTGNKGILDHIRFCIMTISLELQEPTRISTVYRGPRSGPHVQVSLHVARPCLLFEVLPMT*

>peptide 11 (58 aa)
MKNEECPAPLFSSLRSKILKLVKTRPLFHSELVPRTPGTLASANSEQLRIASRTYSTL*

>peptide 12 (60 aa)
MRGAPIEKYWRASKIKMFPCNSHKFLTVLGWNDLFVLNIHIQGQRISYCYRYHIVFISPW*

>peptide 13 (52 aa)
MIAPLEPHFPNEPEPIRIDPVTDLLQNEYNSFSSDSYRQVYPFQISFRSNDL*

>peptide 14 (54 aa)
MQTFPMLRFPSIRSCRVRGTSERLPSRIQTRSHKAQNKNMTNRDFIRDHLSCRS*

>peptide 15 (51 aa)
MERPVRLEYPYSRPKNFLLLPLSYSIHLSLVINKPYVPLLIYQIFHQMDFV*

>peptide 16 (52 aa)
MGKRTERNLSGWETEIPRRIKMGRFIISKNWGQSQPNRLSIRKPRTSSHALL*

>peptide 17 (50 aa)
MGNLPCSTTDSVLAPLLSDLPRDKSSPRSLVFPVHLFLLRSTGSFPDPFH*

>peptide 18 (51 aa)
MAFSFNQIEYRSAVLVMVPQDQIFSPKSTLPRFYGSGRAFRPGFLCCRGPF*

>peptide 19 (40 aa)
MNSQGSNKSNIDSFGRVNWANTSIMTRMYISYAKTNSSPC*

>peptide 20 (41 aa)
MGEGGGTKDKSVQSIVRAALTKQSFLEEAGLVPFLARPALI*

>peptide 21 (45 aa)
MSLTTRCRHSPCCGSLRSVPVGLGEHLSDCLRGSKRALTRRRIRI*

>peptide 22 (49 aa)
MQEEDRKGNCIIMQKRAASFFYYKYNTLYNSPYFFYYNILKKQENVLSK*

>peptide 23 (34 aa)
MLFTRPIEIEGFFMPCSALTFIYKTHGEEDRTEP*

>peptide 24 (36 aa)
MYDWASDRLTRFLPPVRMRAPFLRQVVRARYSKTNH*

>peptide 25 (37 aa)
MAPLICFFFFRASSSATRFYVRSARPRRDKALPNSPF*

>peptide 26 (38 aa)
MNRTSTSSATPPPPPPALTARYPNPTCSCPRSSLSIPR*

>peptide 27 (33 aa)
MLAPHETLFLLTKKALISQLDPLPIQLCRLLRE*

>peptide 28 (33 aa)
MIFLPDLILWCRYKQKSRYGPIMNKYRGFAIKD*

Sequence

>CNT3052251
CTCGGACCGAGAAAGCGGAACTGCTTGACGCTGCATATTCGAACTCATTAAAGCTCGATTCGCATCATTATGTTTGATAAAAGGAATGAGGGGAGCTCCA
ATAGAAAAATATTGGAGGGCTTCGAAGATCAAGATGTTCCCATGCAATAGTCACAAATTCTTGACGGTATTGGGATGGAACGACCTGTTCGTCTTGAATA
TCCATATTCAAGGCCAAAGAATTTCCTATTGCTACCGTTATCATATAGTATTCATCTCTCCTTGGTGATAAATAAACCATATGTTCCTCTTTTGATCTAT
CAGATATTTCATCAAATGGACTTCGTATAGATCCCCAATCACCGATCCTTGCATGAATAGCCAAGGATCCAATAAGTCCAACATTGATTCCTTCGGACGT
GTCAATTGGGCAAATACGTCCATAATGACTAGGATGTATATATCGTATGCGAAAACTAACAGTTCGCCCTGTTAATCCTCCGGGACCCACATAACTCGAT
TTTCGCCCATGAACTATTTGTGCCAATGGATTAGTTCAATCCAAAACTTGAGATAAAGGGTGTAGACCGAAAAACAATTCATAAGTGGTTGTTAATGGAC
TTGAAGTTACCAAATTTTGAGGAGTCGGTAAAAATTTATGCATGATTGCTCCCCTCGAACCACATTTTCCAAACGAACCAGAGCCAATCCGAATTGATCC
TGTAACAGATCTGCTACAGAACGAATACAATTCTTTTTCAAGTGATTCATATCGTCAAGTGTACCCATTCCAAATTTCATTCCGATCAAATGATCTGTAG
CAGCCAATACATCTCGTGGTAACAAAAATGTATTGTTCTAAGGTATATCAATATTCAATCTCTAGTTCATATTTTGTCGACCAATCCTTCCTAATTCACA
TCTTTGTTGAAAAATCTCTTTTGTAATTCCTTACAGAGGGACTCAGAAAATACCGGATCCTCGCCTACACAAGAAAATTGTTGATAAAACTCCAAAATAG
CATTTTCCTTCGACCCAATTTTCTTTTTCTCTTTCTCATTCAGGAAATACAAGAAAATTTCGGGGTAGCAAACATTTTATAGAATTTCTCTTAGATTCGA
ACCCAGATATAACTAGAATAGAAATTTTTTTGTTTCTTGCTCACACGGGCCCATATCCTTGCTTTTCTATCAATCTCTAATTATGATCTTTCTCCCTGAT
CTGATATTATGGTGCCGGTATAAACAGAAATCCCGTTATGGTCCAATTATGAATAAATACCGGGGTTTTGCAATCAAAGATTGATCACAATTCTGTATAT
TCCATTTACTATAAAGGTTCCCAGAGAATTCATTAGAGGAATGTTTCCAATAAATACGGTAAGCCAGCGCAGGTTCCTTGCTTCCAAGCGCTTGCTTGCG
CAAAGGACCCGATCGGACCCCTTCTTAATGACTCAGAGCGCTATGGCTTTTGATGCTCCACTACTAGCTAAAAGGAGTGTCGAAAGAACTATGAACAAAG
TTCATTTCGTTCTTCAATCATTCATTCGATAGGCGTGATTCCCCGGAGGCAGGACACATGCTGTTCACTCGGCCTATTGAAATAGAAGGATTTTTCATGC
CCTGCTCTGCTCTCACGTTCATATACAAGACCCATGGGGAAGAGGACCGAACGGAACCTTAGTGGCTGGGAAACAGAGATCCCGCGGAGAATCAAAATGG
GCAGATTCATAATAAGCAAAAACTGGGGACAGAGTCAACCTAACCGCTTATCTATTCGTAAGCCGCGCACTTCAAGCCATGCCTTGCTATAACCAACCTC
ACTGATCCCACTCAATCTTTTACACCGATGTATCGTACTCTCTCTACCAGGTCATCATAATTGAATACTGCTCAATCTTTCCGAAGTAAGAGATTCCACT
CGCTGCTCGCTGAAGCTCGCTTTCTCTCAGTCATTAGTGGCTTATGTAGTGGTCGCCATTCCTACGTGCTCATCCTTGCCTTGCCCCCCCTACTTAAGAT
TCAAAAAGTAACCAACGAGCAAAGCCAGTGGTAGCCACGTCTTGTCAAAGCCCTCAACAACAAGGGCTTTGACAAGACTTGGCTAGAGTGCTTTAAGGTT
TATGGATGTACAAAGGTTGACTTTGTCAGAAAATCAAGTAGGTTTCGAGGGTTCATTGATTAGTAAAACTTCGATGCTGGTAAGGTCGGGACCGTGGTCG
TCCGTCTCCGGTTTGCCGGCCGATAAGATCTCTGAGATTGACCAACCAGCTGGGTTGGTTTGGCTATTCCTTTCTATTGAAAAGGAGTCTCAGCTGTCTG
GCGAGTAACCTTCTTTTAAGCTCCGAGTCACCTTCTTCTAAGCTGCGCTGGACGACATGGCATTCTCGTTCAATCAAATAGAATATAGGTCGGCCGTACT
TGTGATGGTTCCCCAGGATCAAATATTCTCACCTAAGTCTACATTGCCACGGTTCTATGGAAGCGGGCGGGCTTTTCGGCCCGGTTTTTTGTGTTGTAGG
GGACCTTTCTAACGCATATTCTGTCGTACCGACATGGCCCCACTAATTTGTTTTTTTTTTTTCAGAGCATCAAGCAGCGCAACCCGGTTCTACGTCCGAA
GTGCTCGTCCAAGGAGGGACAAAGCTTTACCCAACTCCCCTTTTTGATAATAAGGCAGAAAGCCCCGACCCGACATTCATTAGTTTCGAATGAAGAATGA
AGAGTGCCCTGCCCCTCTTTTTTCTTCCCTAAGATCCAAGATTTTGAAGTTGGTAAAGACCCGCCCTTTGTTTCATTCAGAATTAGTCCCCCGGACCCCG
GGGACATTGGCTTCCGCCAACAGTGAACAATTAAGGATCGCATCCCGCACATATTCTACATTATAGCTAGCAACTGATTCAGCTTCTGCTTTTGGGAGAT
CAGACGGAGCTCGATTAGTTTCTGCTAGACGAGGAATGAGGAACATGACCAATACGGGGAATAAGGGAATATTGGACCATATCCGCTTTTGCATCATGAC
AATCTCACTCGAATTACAGGAACCTACACGTATTAGTACAGTATACCGGGGTCCCCGATCAGGACCACACGTGCAAGTTTCCCTGCATGTGGCTCGTCCG
TGCTTGCTTTTCGAGGTGCTGCCAATGACTTAGCATGGGAGAAGGAGGTGGAACTAAAGACAAAAGTGTTCAGAGCATTGTCCGGGCAGCGCTTACCAAG
CAAAGCTTTCTTGAAGAGGCTGGGCTGGTTCCTTTTCTAGCCCGGCCCGCCCTTATTTAGATGTTGAGGCAAGGCAAGCCCAAGGAAAGTATAGTTAGCT
CCATCTCGGCCGACATCCAGCTCTCGAGGGGGGGGGGGGGGGGGTTCTGGAGCTAACTACTCATGTGCAGTGTTGCCCCAACCCAAGGGCATTTGGTTGG
TGAGAAGCTATGGTCCGGTGGTTGACAAGCCACTTCAAGGGGGGGCTGGACTAGAGTGCTTTCATCAAATGATGCATGTGGGCTGCCCGGTGGCCCGATT
CGGCCTGGTCGGTAAGAGATTCTAATAAAGACTACTGCTATCCGAGAATATATATCTATCTTAGCTAGCGGGGGCGGGCTTTCCTCTGGTAGTTCCACTG
CGGCCTCTGACCCCATCTTATCTTGAAAAGGCAAGACTTGTAGCCAGCCATGTTAGCTCCACATGAGACCCTTTTCCTATTGACTAAAAAGGCACTCATC
AGTCAACTCGATCCCCTTCCTATTCAGCTTTGCCGCCTATTAAGAGAATAGGTCCCTCCCGTTCAAGCGGCCCGACTTTCCCAAATGCCCACCACGCATG
ACCCCATAAATAGGAACGATTTATGCGTTGTGCCCCTCTCTAGATAAGAAGCAGAATAAGCGTGCCATCACCTACAGCCCTTTCCTCTGCCGGGCACTTC
CACGAAATTCAAACAGGCAGCATCGTCGTATGCTCGACATTTGTTGCCCTGGTGTATATCCCGGAGTACTCCTATGGCTGATCTGTCACCCATACATTCT
TGGCCCCGTCCCGTGCCCCCCTTACGGCTAACGGCTTAGTCAGTTATTCTCACAGTTCAGATAGGAGGACCACCACTTCTCTGAAAGCATGGTTCTTGCC
TCCCTCCTTGGAGCTCGTCCATTCGTTGGGTGATCCCTTGCTCTCACGTTCGAGTGTTTGCTCGTCGTTTAGGCCGGTGAGTGGCATTTCTGCTCATTGC
AGCCACCTCCGGGCTTCTTCGCACCTGGATAGTACCAGGACCCTTGTGCCCCGAACTGTCAGCCCGAAGCCCACCCTACGACCCACAACTCCAAATGAGC
CTTACGACGAGATGCAGACATTCCCCATGCTGCGGTTCCCTTCGATCCGTTCCTGTCGGGTTAGGGGAACATCTGAGCGATTGCCTTCGCGGATCCAAAC
GCGCTCTCACAAGGCGCAGAATAAGAATATGACCAATAGAGACTTCATAAGGGACCATTTGAGCTGCAGATCGTAATGCTCCTAGAGAGGCATATTTCGA
ATATAGAGCAGTTCCTGTTCCCAACAATCAACGAGAAGATCATAGCCCCACCCGATCCTCTATGAATCGTACGAGCACGTCCTCCGCCACCCCCCCCCCC
CCCCCACCCGCGCTTACGGCTCGATACCCCAACCCAACTTGCTCTTGCCCCCGATCCTCCCTTTCTATTCCTCGGTAAGCTGGCTTCTACAGCCCTCCTT
CGTCTATTTGGGACCCCAGATCTGGAGTAGAGTGAAAGGATGTATGATTGGGCGAGTGACCGATTGACGAGGTTTCTTCCTCCCGTTCGGATGCGGGCCC
CCTTTCTACGACAGGTGGTTCGAGCGAGGTACTCAAAGACTAATCATTGAGATCAATACGGCCTCTTAACCACGTTTGTGGCTTGATACTTATAGGGGTT
CCCCCCATCCGCACGCAAATCTTTGAGTAGCTTTCTCAAAAACCTACGTTTTTTTGGTTTCTTCCAGGATAGTTCTCCGATGATTGCAGAGACCACATCA
GGAGTGGATGGGAAATCTTCCCTGTTCAACCACTGATTCCGTACTTGCTCCTCTATTAAGTGATTTACCTCGTGATAAATCGAGTCCTCGATCTCTCGTA
TTTCCTGTGCATCTTTTTCTGCTAAGATCAACCGGATCCTTTCCGGATCCCTTTCATTAATAGGGTCAAGTGGCTGCGGCTCATGGCCGCCCATCCATGG
ATTCTAGAGATTGGGATTTTGCCCCCCCGCTTGATCGGGATCCTGATGAGCCTCACCCACTAATGGTTGAGCCTCTACCCTTGGTGGGTGATTGAGATCC
AGATCTAACCTAGGGTGTGCTTCCATAGCATGGGCAATCTCTGCGGGCATTACGTAAAAAAAAAATGCAAGAAGAGGATAGAAAAGGCAATTGCATAATA
ATGCAAAAAAGGGCTGCTTCTTTTTTCTACTATAAATATAATACCCTCTATAATAGCCCGTATTTTTTCTACTATAATATTTTGAAAAAACAAGAGAATG
TTCTGTCTAAATAGAAAGAATATCATTTATATTATAAAGATAGACTTTTTCAGCAACTGAACGGGAAGATCTTTGATCTATTAAGGTTATAGGTCTGCCA
GATAAGCGCTTAGGTTGGACCTCCCAACACAACAACCCGCATTTATCTGCCACAGAATAGATTGAGGAACTAAAGACATTTTCAATACCGACAGCAGCTC
CCGCTGAAGCAATTGTAGCAGCTCCGGCACCTATTGATTTAGCACCTTCTAACATAAAGAGTTCGAGTAGAGAACGTCACGCTTTTCCTTCTCTCATATA
TACATAAATTACAGATTGATTTGATTCAGTGGATACGCGGCGGGCTCAACACGCACGATCGACAGAATA