Detailed information on CNT30522505


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640997Setaria italicaNymphaea colorata34.5534.9184.21133forward
CNT30562761Setaria italicaActinidia chinensis57.6620.0587.84222forward
CNT30136353Setaria italicaLolium perenne6025.4796.1231forward
CNT30202534Setaria italicaHelianthus annuus34.8128.0381.34134forward
CNT30362074Setaria italicaSorghum bicolor55.3237.8397.18213forward
CNT30101892Setaria italicaOryza rufipogon57.9236.4494.62223forward
CNT30576296Setaria italicaOryza barthii57.9247.3594.62223forward

Expression of CNT30522505

Peptides detected in this lncRNA

>peptide 1 (84 aa)
GEADGVVEDAVGPVVVGVGPAGDADDGEVLAVGARDGVEHAEAPDGEGDGARPHAARAGVPVGGVPGVELVAAADEAAREVAPQ*

>peptide 2 (92 aa)
MALSTLRPPTVKVTAHAPTPRARAYPSAAYPALSSLQQPTRRRARWRPSDASPAGRVAAGCAGVDAIGHPGADAGQPTTVPFPAPNAGPSTDP

Sequence

>CNT30522505
GGGGAGGCCGATGGTGTGGTGGAGGATGCGGTTGGTCCCGTAGTCGTTGGAGTTGGGCCCGCCGGCGATGCAGATGACGGGGAGGTTCTCGCTGTAGGCG
CCCGCGATGGCGTTGAGCACGCTGAGGCCCCCGACGGTGAAGGTGACGGCGCACGCCCCCACGCCGCGCGCGCGGGCGTACCCGTCGGCGGCGTACCCGG
CGTTGAGCTCGTTGCAGCAGCCGACGAGGCGGCGCGCGAGGTGGCGCCCCAGTGACGCCTCCCCCGCCGGCAGGGTCGCCGCGGGCTGCGCCGGCGTGGA
CGCCATCGGGCACCCGGGAGCCGACGCCGGGCAGCCCACCACCGTGCCGTTCCCCGCCCCCAACGCCGGCCCGTCCACGGATCCG