Detailed information on CNT30522343


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT309592Setaria italicaZea mays42.4362.3295.35129forward
CNT30620135Setaria italicaCajanus cajan31.2530.3588.4295forward

Expression of CNT30522343

Peptides detected in this lncRNA

>peptide 1 (64 aa)
PETQGDSDWSSWASQCPESACRCHRWPRCRAGWRHQYAPEESGWRARCCRAQQQRLTPGEMGTQ*

>peptide 2 (55 aa)
LRHKAIQIGVVGPLNVQRAPADVIDGLVVEQDGDISMLQKRVGGEHAVVGLNNRG*

Sequence

>CNT30522343
ACCTGAGACACAAGGCGATTCAGATTGGAGTAGTTGGGCCTCTCAATGTCCAGAGAGCGCCTGCAGATGTCATAGATGGCCTCGTTGTCGAGCAGGATGG
AGACATCAGTATGCTCCAGAAGAGAGTGGGTGGAGAGCACGCTGTTGTAGGGCTCAACAACAGAGGTTGACACCTGGGGAGATGGGTACACAGTGAAGCC
CAGCCAGAACCGGTGCCACCACCAACAGCATTGAAGACCAGAAAGCCCTGAAGGCCAGTGCAGTTGTCAGCAAGCTTGCGGATGCGGTCAAGGCACAGAT
CAAC