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Detailed information on CNT30522327

BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)

Target	Query species	Target species	Query coverage (%)	Target coverage (%)	Identity	Alignment length (nt)	Orientation
CNT30692341	Setaria italica	Oryza sativa	13.62	26.38	88.06	67	forward
CNT30678493	Setaria italica	Setaria viridis	47.36	71.25	99.14	233	forward

Expression of CNT30522327

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MEGRPILLSLLSIDQMARTRRRKRGRRRRKTRRPAWEEQLQWRRRSWRRRRRRGG*

Sequence

>CNT30522327
CCACAATTTACCATCATTTCCATCAGACCGTAACGGATCATCACAACAGCAGCAGTAGTAATGGCAGTACACACCATAGTCCATGACTTGACTTATCGGA
CTAACACTACTAATCCAGCACACACACGCTAAGCAATGCAACTGCCAACTGGTAACGGAACCTCACAACTCGGAGCAGTTCAGCTCAGCCCATACGCATT
CGTCTTCACCGATTAACTGGCTTCGACGTCACCGACTAGAGAAGTTGCAGATTATTTATGGACTAATATTAGTAGTATATGTAATTATGGAGGGGCGGCC
GATCTTGCTGTCTCTGTTGTCGATCGATCAGATGGCGAGGACGAGGAGGCGGAAGAGGGGGAGGAGGAGGAGGAAGACGCGGCGTCCTGCTTGGGAGGAG
CAGCTGCAATGGCGGCGGCGTTCTTGGCGGAGGCGGCGCCGGAGAGGAGGGTGACGGTGAGGTCGGTGTTGAAGTACTCCCTGAGCTGGGTG