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Detailed information on CNT30522318


BLAST search results

BLAST vs Swiss-Prot:
sp|Q10J20|D14L_ORYSJ, E-value = 4e-24

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30128428Setaria italicaCorymbia citriodora57.678.4486.29124forward
CNT30361592Setaria italicaSorghum bicolor43.7212.7496.8194forward
CNT30595990Setaria italicaOryza meridionalis58.659.1593.65126forward
CNT30116140Setaria italicaOryza nivara68.8419.281.08148forward

Expression of CNT30522318

Peptides detected in this lncRNA

>peptide 1 (70 aa)
GDGREQADDGGDGVADVDAGLDAELLEDGEEVERVALERGVAAEVEVVRVVRLLHDPHACCRRDPPPSPLS

Sequence

>CNT30522318
CTGGAGATGGACGCGAGCAAGCCGATGACGGCGGAGACGGAGTGGCCGACGTAGATGCAGGACTGGACGCCGAGCTCCTGGAGGATGGCGAGGAGGTCGA
GCGCGTAGCCCTCGAGCGTGGCGTAGCGGCCGAAGTCGAAGTAGTCCGGGTTGTGCGCCTCCTCCACGATCCCCATGCTTGCTGCCGCCGGGATCCTCCT
CCGAGTCCCCTCTCC