« Back to Setaria italica search


Detailed information on CNT30521912


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535895Setaria italicaEucalyptus grandis34.5921.4885.71119reverse complement
CNT30730672Setaria italicaCorchorus capsularis32.5611.1984.82112reverse complement
CNT30508142Setaria italicaNicotiana attenuata38.0829.9887.02131forward
CNT30161394Setaria italicaPistacia vera22.9736.7486.0879reverse complement
CNT3095993Setaria italicaSolanum tuberosum22.091.988.1676reverse complement
CNT30179912Setaria italicaSecale cereale101.4520.4787.97349reverse complement
CNT30308436Setaria italicaTriticum aestivum102.6249.6588.39353forward
CNT30401480Setaria italicaTriticum turgidum102.9149.188.14354forward
CNT30509957Setaria italicaSolanum lycopersicum33.148.9987.72114reverse complement
CNT30439866Setaria italicaAegilops tauschii44.7763.985.71154reverse complement
CNT3017991Setaria italicaZea mays102.627.0894.33353reverse complement
CNT30605785Setaria italicaGossypium raimondii20.936.587.572reverse complement
CNT30232563Setaria italicaAnanas comosus101.4510.1983.38349reverse complement
CNT30689283Setaria italicaTriticum urartu102.3313.8788.35352reverse complement
CNT30149007Setaria italicaBrachypodium distachyon45.9348.4792.41158forward
CNT30604150Setaria italicaOryza punctata50.2931.9290.75173forward

Expression of CNT30521912

Sequence

>CNT30521912
CTTCTGAATAACTTTAGAAATCATATGGAAGAACCATAGCATTTCGCGACTCATTGGTAAATTTACTTTGATTCTCTATAGACCAATAATGTGAGACCAT
TGACACGGTTAAAGCTAAACTGCTTGAAGTCCGGGCAAAAGGGGATACTCTTTCTACAACTACATTAGTCTCGAAATGCTTTAAACGGGAAATAGCTAGT
GTGGAATTTATCTGATATAGAACACTCATATCGATAAAATAGTTTGAACTATTTACTAGAAGGGCATCCAGCCCTTTTTCCAATGCCGAATCGACGACAT
ATGTATAAAAGAGAAAGTTTTTGGATTTGAAGAAAAAATAAAAG