Detailed information on CNT30521273


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30285276Setaria italicaTriticum aestivum45.3843.3888.98118forward
CNT30130961Setaria italicaLolium perenne23.8525.6290.3262forward
CNT30105441Setaria italicaOryza longistaminata24.239.7890.4863reverse complement

Expression of CNT30521273

Peptides detected in this lncRNA

>peptide 1 (85 aa)
WPARETFSFLKTEVSKSSDGMAVPTADGAATMAATSRRRVADAERRHAGWVAGKETEAAEVCAAMSSRGTGMASGGRRVVVGDLAP

>peptide 2 (41 aa)
VAGEGDLLLLEDGGLEVERRHGRADGRRRRDHGGDIPAAGG*

Sequence

>CNT30521273
GTGGCCGGCGAGGGAGACCTTCTCCTTCTTGAAGACGGAGGTCTCGAAGTCGAGCGACGGCATGGCCGTGCCGACGGCCGACGGCGCCGCGACCATGGCG
GCGACATCCCGGCGGCGGGTGGCTGACGCGGAGAGGAGGCACGCGGGCTGGGTGGCCGGGAAGGAGACGGAGGCCGCCGAGGTGTGCGCTGCCATGTCGT
CGCGCGGCACTGGGATGGCGAGCGGCGGGCGGCGAGTGGTTGTTGGGGACTTGGCTCCTT