Detailed information on CNT30521250


BLAST search results

BLAST vs Swiss-Prot:
sp|Q2Z2F6|H3L3_LILLO, E-value = 2e-16

BLAST vs NONCODE:
NONORUT005433, E-value = 2e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672434Setaria italicaSetaria viridis35.9242.01100134forward
CNT30547549Setaria italicaIpomoea triloba26.2712.6686.7398forward
CNT30380641Setaria italicaManihot esculenta47.1825.4780.68176forward
CNT30709007Setaria italicaGlycine max43.4368.0785.19162forward
CNT30613891Setaria italicaArabis alpina24.6622.8386.9692forward
CNT30609694Setaria italicaGossypium raimondii23.8611.6283.1589forward
CNT30358481Setaria italicaLactuca sativa45.5818.5680.59170forward
CNT3051266Setaria italicaCucumis sativus48.7924.2781.32182forward
CNT3018856Setaria italicaCyanidioschyzon merolae35.1256.9683.21131forward

Expression of CNT30521250

Peptides detected in this lncRNA

>peptide 1 (32 aa)
DNERLHQTLHHQDRTTSREIKLLPHNDITQAK*

Sequence

>CNT30521250
TGATAATGAGAGGTTACATCAGACGCTACATCACCAGGACAGAACCACATCACGAGAAATAAAACTTCTACCTCACAACGACATAACACAGGCTAAGTGA
CTTAGGAACACATCTCTACACTTCCCCCGATCAGCAGCTCCGTGCTCTTCTGGTACTTGCGGATCTCACGGAGCGCGACGGTGCCGGGGCGGAAGCGGTG
GGGCTTCTTCACTCCGCCGGTCGCCGGGGCCGACTTGCGGGCCGCCTTGGTCGCCAGCTGCTTGCGGGGCGCCTTGCCGCCGGTGGACTTCCTCGCCGTC
TGCTTCGTGCGGGCCATCGGAGCGGGAGGGTTGGGAAGTGGAGGGCGCGAGGTTGCAGGAGGATTTGGCAATT