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Detailed information on CNT30521057


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30582819Setaria italicaEchinochloa crusgalli26.1516.4197.08137forward

Expression of CNT30521057

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MELPPRPFTATGCTETAAREAMAFAEYCRGYYR*

>peptide 2 (33 aa)
DRLYEARSTNFNCICRSTISTSIKRGSDRISTG*

Sequence

>CNT30521057
CCGACAGGCTGTACGAGGCACGCAGCACCAATTTTAATTGTATATGCCGGAGTACAATATCAACATCGATAAAAAGAGGCAGCGATCGAATATCAACAGG
ATAACAGGCAGAGATCCATGGTGATGATCGGAGCTAGCAGTACAAGCAAAGCTAGTAGGCGAATGGAGGAGGATCGGAGGAGCAACTGAACTTAGATCTT
GCCGCGCGGGCCCGGCACCGGCGGCTGCTGCGGCCCCTTCTTGATCGGCAGGAGGTCCGGCGACGCCGACGCGCTGACGTAGGCCAGCAGGGATCCGCCG
CCCAGCAGCAGGAACTTGAGCAGCAGGCGGCGCGGGGCGCCGGCCTGACGGCGAGCCTCCTGCCGGAGATGGAGCTGCCGCCGAGGCCCTTCACGGCGAC
CGGCTGCACGGAGACGGCGGCGAGGGAGGCCATGGCGTTCGCTGAGTACTGTCGAGGTTACTACCGGTAGTGTCCAAGTGCGTACGTGCGCAAACTTAAT
TCGGCGGATCGTGCTAAGGATCCG