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Detailed information on CNT30520387


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188045Setaria italicaSecale cereale24.897.9291.15113forward

Expression of CNT30520387

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MSNCWWGRRMTWRLRRTSWRPSWMRRCSGRAAGAWRRRRRGGGPGCTASGPGSAGPPPRLR

>peptide 2 (34 aa)
MFWQSCWSLASTETWRRAWMYCIWAGLSWPAPSAP

Sequence

>CNT30520387
CGTTAAGCTTCTGCTGCTGTAGTAGTAGTAGGAGCCAAGAAGGAATGGCGGGTGGTTAATTGGCGGCGAGGAGGGAGTCCCAGTCGATCTCGTACGACGG
GTACTTGGTGAGGGCGAAGCCGGCGGCCTCGTCCCACGGTGCCTCGCTGAAGTCCAGCTGCTGCATCTCCGGCACCGTCGACTCGGGCGAGGCGGACGGC
GACGGGGACGGACACGAGGACTCGGCGGCGGACTCGAGGCAGGACGAGGTCGCGTCGTCGGAGGACGGCGATGAGCAATTGCTGGTGGGGGCGGAGGATG
ACGTGGCGGCTGCGGCGGACTTCTTGGCGCCCTTCTTGGATGCGGCGATGTTCTGGCAGAGCTGCTGGAGCTTGGCGTCGACGGAGACGTGGAGGCGGGC
CTGGATGTACTGCATCTGGGCCGGGCTCAGCTGGCCCGCCCCCTCGGCTCCGGC