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Detailed information on CNT30519965


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30150498Setaria italicaBrachypodium distachyon7.1123.5189.5567forward
CNT30496055Setaria italicaDigitaria exilis54.9927.4488.22518forward

Expression of CNT30519965

Peptides detected in this lncRNA

>peptide 1 (91 aa)
MHHKRHHTWNHHTHRQNQTQSQHCLHSHTLYRSHILLLLHHCHIHSLPQQTYKHHHTHNHHHRQHRHHRCHRCRCQLHHYGKNCGNHHPRG*

>peptide 2 (71 aa)
MAIVNCSKKQCYSTKYSSTAPNTVPTIKRLFLRVLSSLHITKLKNTTQVSSVASAAKGRRAGSATAITQLL*

Sequence

>CNT30519965
CTCAGATTTATGTCATTGTTCCTGGGCATCCCGTAGTTTCCATGTCAAGAATATTAATCAACAATCAGTTTGAAGACTAAAACCAAATCCTTTAATGAGT
TCCTAATTATAATCACCACAGATGGCAATTGTTAATTGCTCCAAAAAGCAATGTTACAGCACAAAATATAGTTCTACCGCACCAAATACTGTTCCTACCA
TAAAGCGTTTGTTTCTCAGGGTTCTAAGCTCTCTGCATATTACCAAACTAAAGAATACAACACAGGTTTCAAGTGTAGCTTCTGCAGCAAAAGGCAGGCG
GGCGGGCTCAGCAACTGCAATTACACAGTTGCTCTAGTAGCGACTAAGTTCAACCCAACAATGTTCCATTGCCGCTGATTAGGTGTGGCCTCACATGAAA
ACTGAACTTCTAGAAGGCACGAGGAACCCCCGGGCCCTAGAAAACCAGATTAAACTTGTCGCTTATTTTCCATATGGATGATACCTGCTAGAACCCCGAG
CACCTGAACTCCCACCACCAGCACCACCTGCTCCACCTGCTCCCCCATAACCGCCATATCCGCTGGCACCATAGCCACCTGGGGCACCACCACCGTAGGC
ACCATATGCACCATAAGCGCCACCATACATGGAACCACCATACCCACCGCCAAAACCAGACCCAAAGCCAGCATTGCCTCCATAGCCATACCCTCTACCG
TAGCCATATCCTGCTGCTCCTGCACCACTGTCATATCCATAGCCTGCCGCAGCAGACCTATAAGCACCACCATACCCATAACCACCACCACCGCCAGCAC
CGCCACCACCGCTGCCACCGCTGCCGCTGCCAGCTCCACCACTACGGTAAGAATTGCGGTAACCACCACCCCCGTGGCTAGATCTACCGTTACTGCTGTG
ATCAGATCCATGCTTCTTTGGTTCAGCCTTCTTTATTTCAAC