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Detailed information on CNT3051979


BLAST search results

BLAST vs Swiss-Prot:
sp|P80264|NDUS2_SOLTU, E-value = 3e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30267815Amborella trichopodaChenopodium quinoa20.345.9485.71119forward
CNT30556131Amborella trichopodaOryza glaberrima22.0513.0288.37129forward

Expression of CNT3051979

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MVRTHIDYHEVDSCSRYSHIFSFPIQYLINC*

>peptide 2 (31 aa)
RERRFGWLCKGGRNLELRSLRTTPLSQTPLC*

>peptide 3 (33 aa)
GSGVLGGFVKAGETWNFALFAPRRSARPLSADP*

Sequence

>CNT3051979
AGGGAGCGGCGTTTTGGGTGGCTTTGTAAAGGCGGGAGAAACTTGGAACTTCGCTCTCTTCGCACCACGCCGCTCAGCCAGACCCCTCTCTGCTGATCCC
TAGCGTTTGCTCATCTCGTTTATTTGTCACCGGTTTATTTCAGCAGCTGCCGCGAAAAAGGTCTGAACCTCGATCTCATCTGCCCCTTTTCCCTGTGTTA
CGCCCTCCTCTCTCTCTAAAGGAAGATATTGTATGAATGTTCGATTTTCTGCAATTTTTTTCATCCCACTTTGTAAATAACCTAATATGGGTTCACAGTC
AATAACGTCTTCACCGTCTAGAGTAACTATGAGTCGAAGAACACCATGCATTGATGGATGGTAAGGACTCATATTGACTATCATGAGGTCGATTCTTGTA
GCCGATACAGTCATATATTTTCTTTCCCGATTCAATATTTGATAAATTGCTGAAAATGAAACGAAGTTCATCAAAATCCAAGATTTAATGAACCCAATAA
TTCATCTTAAATACAAATTTTCAAATTAACGAGTCTTTGGCTCCCGAATATTCAACTGACCGATTAATTTCTTATAACGTACTTT