« Back to Juglans regia search


Detailed information on CNT30519480


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30434077Juglans regiaPapaver somniferum73.2498.8395.821100forward

Expression of CNT30519480

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MWAVRCRQRREKSTETYHLEEGEVVTRFP*

>peptide 2 (47 aa)
MGGGACPFLVGGAICLVNSVNERDLSLLTSYAEVTFSCQLLRGIMAA*

>peptide 3 (52 aa)
MINRNSRGHSYFIVGGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

Sequence

>CNT30519480
ATCATTCTTTCTGCCCTATCAACTTTCGATTGTAGGATAGAGGCCTACAATGGTGGTGACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCC
TGAGAAGCGGCTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTA
CGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATA
GCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTGGTTGGATCTTGGGTTGGGCAGAGCGGTCCGCCCCTGGTGTGCACCGGTCTGCTCGTCCCTTCTA
CCGGCGATGCGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGTGCTATTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACA
TTAGCATGGGATAACATCATAGGATTTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGAACAGTCGGGGGCATTCGTATTTCATA
GTCGGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAG
ACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTAAGGACTCCGCCGGCACCTTATGAGAAATCAAAG
TCTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCCGGAGTCCAGACATAGTAAGGATTGACAGACT
GAGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGCCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCT
GCTAACTAGCTATGCGGAGGTGACCTTCAGCTGCCAGCTTCTTAGAGGGATTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATG
CCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTTTATAGCCTTGGCCGACAGGCCCGGGTAATCTTTGAAATTTCATCGTGA
TGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTATTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACC
GCCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGAGGCGATGTGGGCGGTTCGCTGCCGGCAACGTCGCGAGAAGTCCACTGAAACT
TATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGATACCTGCCCAGCAGAACGACCTGTGAACATG
TA