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Detailed information on CNT30519243


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3021657Juglans regiaCitrullus lanatus6862.896.3920forward

Expression of CNT30519243

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MITRRIARPSCRRRIIQISALSTFDCRIEAYNGGDG*

>peptide 2 (44 aa)
MHLLDKRSTRALPVALMIHDNSTDRTAIVPATHHSNFCPINFRL*

>peptide 3 (30 aa)
PASSHMLVSKIKPCMCKYELIQTVKLRMAH*

Sequence

>CNT30519243
ATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAG
TTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTA
GATAAAAGGTCGACGCGGGCTTTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTTCT
GCCCTATCAACTTTCGATTGTAGGATAGAGGCCTACAATGGTGGTGACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCT
ACCACATCCAAGGAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCC
AAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAG
ATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTA
TCGATCCTTTGGACCTTCGGAATTTGAAGCCAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCT
TTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGA
CCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCG
CGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGT
CGCCCGATTGCCGACCTGCAGTAGGGGCCTTAGGGCCCCCAGAGGCACGTGTCGTTGGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAG
TACAATTCTCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGTCTTGCTGCCACGATCCACT
GAGATTCAGCCCTGTGTCGCTTCGATTCGTCCCTCCCCCTCAAACCACATCAC