Detailed information on CNT30519190


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30163328Juglans regiaPistacia vera57.284.3694.021187forward

Expression of CNT30519190

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MHLLDKRSTRALPVALMIHDNSTDRTAIVPATHHSNFCPINFRL*

>peptide 2 (36 aa)
MITRRIARPSCRRRIIQISALSTFDCRIEAYNGGDG*

>peptide 3 (65 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTPLSLTLVRLCEMRGVEAGAEKAK*

>peptide 4 (31 aa)
DPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPR*

Sequence

>CNT30519190
TGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATC
AGTTATAGTTTGTTTGATGGTATCTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTAT
TAGATAAAAGGTCGACGCGGGCTTTGCCCGTTGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAAATTT
CTGCCCTATCAACTTTCGATTGTAGGATAGAGGCCTACAATGGTGGTGACGGGTAACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGG
CTACCACATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTACGAGTCTGGT
AATTGGAATGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTT
AAGTTGTTGCAGGATCCGTAGCCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCG
AGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGATCGCTTCGGCGGTCTTCCCCGGGCGTCGAACAGTCGACTC
AGAACTGGTACAGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTC
TGAATGTCAAAGTGAAGAAATTCAACCAAGCGCCGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGAC
GCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGA
CCCCGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGAGAGGTGTGGAGGCGGGAGCCGAAAAGGCGAAGTGAAATACCACTTTAACGTTATTTTACTT
ATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATCGTCAGGTGGGGAGTTTG
GCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCATTTG
ATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATTTGAAGCCAGAGGTGTCAGAAAAGTTACCACAG
GGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTG
TTGGATTGTTCACCCAACAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAATTC
AACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACCGAAC
GCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCGCCCGATTGCCGACCTGCAGTAGGGGCCTTAGGGCCCCCAGAGGCACGTGTCGTT
GGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTAGAATCCTTTGCAGACGAGTTAAATACGCGAC
GGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCTTCGATTCGTC