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Detailed information on CNT30519180


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639835Juglans regiaNymphaea colorata78.5677.6493.342598reverse complement
CNT30318007Juglans regiaCorylus avellana83.8579.3498.022773reverse complement
CNT30195048Juglans regiaPisum sativum100.0687.9894.713309forward
CNT30508033Juglans regiaNicotiana attenuata94.7494.0893.973133forward
CNT30711135Juglans regiaGlycine max81.5284.8695.292696forward
CNT3047210Juglans regiaPrunus dulcis76.9679.1195.212545forward
CNT30163337Juglans regiaPistacia vera41.8299.9395.371383forward
CNT3073523Juglans regiaBrassica juncea59.675.7294.621971forward
CNT30210115Juglans regiaHelianthus annuus90.942.289.853006forward
CNT30433917Juglans regiaPapaver somniferum82.49100.0795.012728forward
CNT3035495Juglans regiaCucumis melo100.1562.8895.533312forward
CNT30583181Juglans regiaEchinochloa crusgalli68.1696.1694.322254forward
CNT30335982Juglans regiaCynara cardunculus96.4397.1789.973189reverse complement

Expression of CNT30519180

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCASQRASKPVRRKEADWWDPLVGCTADRP*

>peptide 2 (40 aa)
MNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (37 aa)
MGAGDAPRSDVERCMPVCRSTRGVDRCGLRRRPKPGL*

>peptide 4 (36 aa)
QVRRDYPLNLSISISGGKETYKDSPSNGERTGKSPA*

>peptide 5 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 6 (40 aa)
MQPQLGGKFRPRLNMGERPIANKYREGKMKRTLKRESKSA*

>peptide 7 (51 aa)
MRIAAAAQARVVVMPAETSLPRSWRAARAARRASASACSWHRPVGTPFGPS*

>peptide 8 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVPLCEMT*

>peptide 9 (85 aa)
MEQCRQGKSAKWIRNLGKGLALRAGHGGPSPEPVGCRWTARAAPAARAGRRVPAGGRTGNDRFGGLPRASNSRLRTGTDKGNPTV*

>peptide 10 (91 aa)
MRPGRMWNGVCRSADRLGAWTDADCGGGPSPGCSHARGDVVAAIVEGSTRRKACFGICVLLASACGHPIRPVLKHGPRSLTCVRVNGLVNP*

Sequence

>CNT30519180
CCAGGTCAGGCGGGATTACCCGCTGAATTTAAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAG
AGCCCAGCTTGAGAATCGGGTGCCACTCGGCATTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCC
GGAGAGGGTGAGAGCCCCGTTGTGCCCGGACCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGCTGTTTGGGAATGCAGCCCCAATTGGGCGGTAAA
TTCCGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAA
ATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGCGCCCCGGTCGGATGTGGAACGGTGTATGCCGGTCTGCCGATCGACTCGGGGCGTGGACCGATGC
GGATTGCGGCGGCGGCCCAAGCCCGGGTTGTAGTCATGCCCGCGGAGACGTCGTTGCCGCGATCGTGGAGGGCAGCACGCGCCGCAAGGCGTGCTTCGGC
ATCTGCGTGCTCCTGGCATCGGCCTGTGGGCACCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCTAGTAA
ACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATACCT
GTCGGGACCCGGAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCT
GACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCACGGGCGAGTTCTATCGG
GTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCACGGCTGCTTTGTTGAGTCGTGCCA
AGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTA
GAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACT
AGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAA
ACCTGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGT
TCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCTGATAGCGTGCTGCACGCGAGCTTCGAAAGGGAATCGGGT
TAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGC
CTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACTTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAA
ATCCGGAGGACCGAGTGCCATCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGG
AAGTCGGCAAAATGGATCCGTAACCTCGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTC
GAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGATCGCTTCGGCGGTCTTCCCCGGGCGTCGAACAGTCGACT
CAGAACTGGTACGGATAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCT
CTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGCCATCTAATTAGTGA
CGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAG
ACCCTGTTGAGCTTGACTCTAGTCCCACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAA
CGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCA
GGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGT
AAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATTTGAAGCCAGAGGTGTCAGA
AAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAG
AATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTC
GCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGG
ATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCGCCCGATTGCCGACCTGCAGTAGGGGCCTTAGGGCCCCCAGA
GGCACGTGTCGTTGGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTAGAATCCTTTGCAGACGAC
TTAAATA