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Detailed information on CNT30519179


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373968Juglans regiaArabidopsis thaliana67.9645.3496.29700forward

Expression of CNT30519179

Peptides detected in this lncRNA

>peptide 1 (41 aa)
ETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNR*

>peptide 2 (43 aa)
MIRFSGLLATLPAANRPHRLDPNTSPDHSIGRSDGRCVQRAGT*

>peptide 3 (44 aa)
MHPFQKSGFVARISSRITTVIRVADTIKQTITDLMSHSQFHSLN*

>peptide 4 (44 aa)
MKFQRLPGPVGQGYKLVEYISVARVRPRTSKGITDLLLPQTSLA*

>peptide 5 (30 aa)
MMRRRHDGRAIRRVIMNHQSNGQSPRRPFI*

Sequence

>CNT30519179
CGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTTGCCGGCAGCGAACCGCCCACATCGCCTCGATCCGA
ACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAAT
TCCTCGTTGAAGACCAGCAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAAACTCGTTGAATA
CATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGA
AGCTGGCCGCGGAAGGTCACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACG
GCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGATTGGGTAAT
TTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTCACCACCATTGTAGG
CCTCTATCCTACAATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGATGGCCGTGCGATCCGTCGAGTTATCATGAATCATCAGAG
CAACGGGCAAAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATC
CGAGTAGCAGATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAATTAGTTCATACTTACACATGCATGGCTTAATC
TTTGAGACAAGCATATGACTACTGGCAGGA