Detailed information on CNT30519140


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730396Juglans regiaCorchorus capsularis54.79100.3196.061600forward
CNT3072442Juglans regiaQuercus suber59.3599.8393.881733forward
CNT30381259Juglans regiaManihot esculenta52.584.691.651533forward
CNT3047192Juglans regiaPrunus dulcis55.8948.0894.981632forward
CNT3027145Juglans regiaPopulus trichocarpa43.0176.7797.051256reverse complement

Expression of CNT30519140

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MCASQRASKPVRRKEADWWDPLVGCTADRP*

>peptide 2 (31 aa)
VLPVAVKVLLDPIASFLRLYHRDPRSGGITR*

>peptide 3 (40 aa)
MNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 4 (40 aa)
MQPQLGGKFRPRLNMGERPIANKYREGKMKRTLKRESKSA*

>peptide 5 (51 aa)
MRIAAAAQARVVVMPVETSLPRSWRAARAARRASASACSWHRPVGTPFGPS*

>peptide 6 (59 aa)
VARRCEGAPRPYCVVPATLPSRPQVRRDYPLNLSISISGGKETYKDSPSNGERTGKSPA*

>peptide 7 (91 aa)
MRPGRMWNGVCRSADRLGAWTDADCGGGPSPGCSHARGDVVAAIVEGSTRRKACFGICVLLASACGHPIRPVLKHGPRSLTCVRVNGLVNP*

>peptide 8 (93 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCSRGESGSPRAGRGTDWERSLRRSSPGVEQSTQNWYGQGGEFGRGGTSVKR*

>peptide 9 (37 aa)
MGAGDAPRSDVERCMPVCRSTRGVDRCGLRRRPKPGL*

Sequence

>CNT30519140
GTGTTGCCCGTCGCTGTGAAGGTGCTCCTCGACCCTATTGCGTCGTTCCTGCGACTCTACCATCGCGACCCCAGGTCAGGCGGGATTACCCGCTGAATTT
AAGCATATCAATAAGCGGAGGAAAAGAAACTTACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCTTGAGAATCGGGTGCCACTCGG
CATTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCGGGCCCAAGTCCCCTGGAAGGGGGCGCCGGAGAGGGTGAGAGCCCCGTTGTGCCCGGA
CCCTGTCGCACCACGAGGCGCTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCCAATTGGGCGGTAAATTCCGTCCAAGGCTAAATATGGGCGAGAGA
CCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGG
CGATGCGCCCCGGTCGGATGTGGAACGGTGTATGCCGGTCTGCCGATCGACTCGGGGCGTGGACCGATGCGGATTGCGGCGGCGGCCCAAGCCCGGGTTG
TAGTCATGCCCGTGGAGACGTCGTTGCCGCGATCGTGGAGGGCAGCACGCGCCGCAAGGCGTGCTTCGGCATCTGCGTGCTCCTGGCATCGGCCTGTGGG
CACCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCTAGTAAACCCGTAAGGCGTAAGGAAGCTGATTGGTG
GGATCCCCTTGTGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATACCTGTCGGGACCCGAAAGATGGTGAACTATGCC
TGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCG
AACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCACGGGCGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGG
CGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCACGGCTGCTTTGTTGAGTCGTGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTT
TTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAG
ACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGC
GCGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGCGAGCCCGGGCGGAGCGGC
CGTCGGTGCAGATCTTGGTGGTAGTAGAAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTT
AGTCGATCCTAAGAGACGGGGGAAGCCCGTCTGATAGCGTGCTGCACGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCT
GACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCCGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGA
GGTAGGGTCCAGCGGCTGGAAGAGCACCGCACTTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATCCACGCCC
GGTCGTACTCATAACCGCATCAGGTCTCTAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGG
GAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCG
CCGCGTGCCGGCCGTGGGACGGACTGGGAACGATCGCTTCGGCGGTCTTCCCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGTGGGGAGT
TTGGCCGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAAAAGCTCGT
TTGATTCTGATTTCCAGTACGAATAAGAAAAGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATTTGAAGCCAGAGGTGTCAGAAAAGTTACCA
CAGGGATAACTGGCTTGTGGCAGCCAAGCGCTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAA
GTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGTTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTCGCAATAGTAA
TTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTTGATTATGACTG
AACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCGCCCGATTGCCGACCTGCAGTAGGGGCCTTAGGGCCCCCAGAGGCACGTGTC
GTTGGTGAAGCCCTCGCAGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTAGAATCCTTTGCAGACGACTTAAATACGC
GACGGGGTATTGTAAGTGGC