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Detailed information on CNT30519123


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730472Juglans regiaCorchorus capsularis64.8594.8395.53917reverse complement

Expression of CNT30519123

Peptides detected in this lncRNA

>peptide 1 (41 aa)
DCLIKTKHCDGPCGCSRNVISAQCSECQSEEIQPSAGKRRE*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 3 (55 aa)
MPRHLISDAHEWINQIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

Sequence

>CNT30519123
GACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAAC
CAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACCAGATTCC
CACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGA
CTTTGTGAAATGACCTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGG
AGGCGGGGCATTGCCCCTCTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGGATAAGTGGGAGCCGAAAGGCGAAAGT
GAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATC
CGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATC
TCGTGTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATT
TGAAGCCAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCT
TCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTA
CCCTACTGATGACAGTGTCGCAATAGTAATTCAACCTAGCACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCG
CGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCGCCCGATTGCCGACCTGCAGTAG
GGGCCTTAGGGCCCCAGAGGCACGTGTCGTTGGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTA
GAATCCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCTTCGA
TTCGTCCCTCCCCC