Detailed information on CNT30519077


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30730441Juglans regiaCorchorus capsularis75.51100.2197.081403reverse complement
CNT30588049Juglans regiaMusa acuminata89.0277.3694.561654reverse complement
CNT3089434Juglans regiaVigna radiata63.8974.0594.861187reverse complement
CNT30445720Juglans regiaSaccharum spontaneum87.5776.4994.471627forward
CNT30355977Juglans regiaLactuca sativa82.2987.3294.241529reverse complement

Expression of CNT30519077

Peptides detected in this lncRNA

>peptide 1 (86 aa)
MCKCRSHGTFPLFGLQSSHLNICYYHQDLHRRPLRPGSRPRFCSDRRALLLIGAWHLPRRPGIGRALQRHPFSGLVDSAGELLHTP*

>peptide 2 (42 aa)
MALGPPDFQGPPGAHRTPREVRCSSSRWTLPPAEPFPGWAGC*

>peptide 3 (53 aa)
MSTTGRGWHSVLRIFKGRRGRTGHHAKCGALPAAGPYLRLSRFQGGQAVKQKR*

>peptide 4 (36 aa)
MLSLEPFSEDQGRSAVQPTRGSHQSASLRLTGLLAR*

>peptide 5 (37 aa)
MAHLELSIPWHDSTKQPCRPTYLKFENRSRALRPRCL*

Sequence

>CNT30519077
GAATAAGTAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAG
TCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTT
AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT
TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTT
GTCCGTACCAGTTCTGAGTCGACTGTTCGACGCCCGGGGAAGACCGCCGAAGCGATCGTTCCCAGTCCGTCCCCCGGCCGGCACGCGGCGACCCGCTCTC
GCCGCGGGAGCAGCTCGAGCAGTCCACCGACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGG
ATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGATGG
CACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGAAGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCC
GTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAACTCTTCCCGAGGCCCCCGCCGACGTCTCCGGACTCCCTAACGTTGCCGTCAGCCGCCACGTC
CCGGTTCAGGAATTTTAACCCGATTCCCTTTCGAAGCTCGCGTGCAGCACGCTATCAGACGGGCTTCCCCCGTCTCTTAGGATCGACTAACCCATGTGCA
AGTGCCGTTCACATGGAACCTTTCCCCTCTTCGGCCTTCAAAGTTCTCATTTGAATATTTGCTACTACCACCAAGATCTGCACCGACGGCCGCTCCGCCC
GGGCTCGCGCCCCAGGTTTTGCAGCGACCGCCGCGCCCTCCTACTCATCGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCGC
CATCCATTTTCGGGGCTAGTTGATTCGGCAGGTGAGTTGTTACACACTCCTTAGCGGATTTCGACTTCCATGACCACCGTCCTGCTGTCTTAATCGACCA
ACACCCTTTGTGGGTTCTAGGTTAGCGCGCAGTTGGGCACCGTAACCCGGCTTCCGGTTCATCCCGCATCGCCAGTTCTGCTTACCAAAAATGGCCCACT
TGGAGCTCTCGATTCCTTGGCACGACTCAACAAAGCAGCCGTGCCGTCCTACCTATTTAAAGTTTGAGAATAGGTCGAGGGCGTTGCGCCCCCGATGCCT
CTAATCATTGGCTTTACCCGATAGAACTCGCCCGTGGGCTCCAGCTATCCTGAGGGAAACTTCGGAGGGAACCAGCTACTAGACGGTTCGATTAGTCTTT
CGCCCCTATACCCAAGTCAGACGAACGATTTGCACGTCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCCGCTCAGGCATAGTTCAC
CATCTTTCGGGTCCCGACAGGTATGCTCTCACTCGAACCCTTCTCAGAAGATCAAGGTCGGTCGGCGGTGCAACCCACAAGGGGATCCCACCAATCAGCT
TCCTTACGCCTTACGGGTTTACTAGCCCGTTGACTCGCACACATGTGAGACTCCTTGG