Detailed information on CNT30519036


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550233Juglans regiaIpomoea triloba61.3267.2695.681896forward
CNT30619309Juglans regiaSesamum indicum57.3180.6695.371772reverse complement
CNT30283199Juglans regiaChenopodium quinoa88.07100.0795.72723forward
CNT30311297Juglans regiaCamelina sativa65.43100.4593.772023forward
CNT30217525Juglans regiaKalanchoe fedtschenkoi57.4198.9491.771775forward
CNT30653443Juglans regiaRosa chinensis42.1799.0995.021304forward
CNT30434068Juglans regiaPapaver somniferum85.4899.8595.162643forward
CNT30574469Juglans regiaVitis vinifera46.837996.341448forward
CNT3023562Juglans regiaPopulus trichocarpa72.25100.0996.692234reverse complement
CNT30176196Juglans regiaVigna angularis47.6798.0793.961474reverse complement

Expression of CNT30519036

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MINRNSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNEI*

>peptide 2 (40 aa)
MNRKPGYGAQLRANPEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 3 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 4 (46 aa)
EVKKLVVGSWVGQSGPPLVCTGLLVPSNGDALLALTGRVVPPVLLL*

>peptide 5 (30 aa)
MCASQRASKPVRRKEADWWDPLVGCTADRP*

>peptide 6 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 7 (85 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGPSPEPVGCRWTARAAPAARAGRRVPAGGRTGNDRFGGLPRASNSRLRTGTDKGNPTV*

Sequence

>CNT30519036
TGAAGTTAAAAAGCTCGTAGTTGGATCTTGGGTTGGGCAGAGCGGTCCGCCCCTGGTGTGCACCGGTCTGCTCGTCCCTTCTAACGGCGATGCGCTCCTG
GCCTTAACTGGCCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAATAT
CATAGGATTTCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGAACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCT
TGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAATCTGACATGTGTGCGAGTCAACGGGCTAGTAA
ACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCCTTGTGGGTTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATACCT
GTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCTGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCT
GACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCCCACGGGCGAGTTCTATCG
GGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCCATTCTCAAACTTTAAATAGGTAGGACGGCACGGCTGCTTTGTTGAGTCGTGCC
AAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAAGCCGGGTTACGGTGCCCAACTGCGCGCTAACCC
AGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAAC
TAGCCCGGAAAATGGATGGCGCTGAAGCGCGCGACCTATACCCGGCCGTCGGGGCAAGTGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAA
AACCTGGGGCGCGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGG
TTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCTGATAGCGTGCTGCACGCGAGCTTCGAAAGGGAATCGGG
TTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAG
CCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACTTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAA
AATCCGGAGGACCGAGTGCCATCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGG
GAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCT
CGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACGGACTGGGAACGATCGCTTCGGCGGTCTTCCCCGGGCGTCGAACAGTCGAC
TCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGC
TCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTG
ACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAA
GACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTA
ACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATTGTC
AGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAGGGT
AAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATTTGAAGCCAGAGGTGTCAGA
AAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTCCCTATCATTGTGAAGCAG
AATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGACAGTGTC
GCAAAAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGG
ATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCCCCCGATTGCCGACCTGCAGTAGGGGCCTTAGGGCCCCCAGA
GGCACGTGTCGTTGGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTAGAATCCTTTGCAGGCGAC
TTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGTCTTGCTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCTTCGATTCGTCCCTC