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Detailed information on CNT30519021


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30283203Juglans regiaChenopodium quinoa72.4100.5293.931532forward
CNT3047202Juglans regiaPrunus dulcis88.8591.5795.531880forward

Expression of CNT30519021

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMTGEV*

>peptide 2 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 3 (33 aa)
DLGGSSKYSNENFEGRRGERFHVNGTCTWVSRS*

>peptide 4 (29 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGS*

Sequence

>CNT30519021
GATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGGTTAGTCGATCCT
AAGAGACGGGGGAAGCCCGTCTGATAGCGTGCTGCACGCGAGCTTCGAAGGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGCTGACGGCAACG
TTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCC
AGCGGCTGGAAGAGCACCGCACTTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCCCGAGGACCGAGTGCCATCCACGCCCGGTCGTACTC
ATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATT
GGCTCTGAGGGCTGGGCACGGGGGTCCTAGTCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCCCGCGGCGAGAGCGGGTCGCCGCGTGCCG
GCCGGGGGACGGACTGGGAACGATCGCTTCGGCGGTCTTCCCCGGGCGTCGAACAGTCGACTCAGAACTGGTACGGACAAGGGGAATCCGACCGTTTAAT
TAAAACAAAGCATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGT
AAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCCCATGAATGGATTAACGAGATTCCCACTGTCCCTG
TCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAAT
GACTGGAGAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCAT
TGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGTAGGATAAGTGGGAGCCGAAAGGCGAAAGTGAAA
TACCACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAGGCGGGGCATTGCCCCTCTTTTTGGACCCAAGGCTCGTTTCGGCGGGCCGATCCGGG
CGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGT
GTGGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTGGACCTTCGGAATTTGAA
GCCAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCT
ATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTACCCTA
CTGATGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAG
CTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCGTCGCCCGATTGCCGACCTGCAGTAGGGGCC
TTAGGGCCCCCAGAGGCACGTGTCGTTGGTGAAGCCCTCGCGGCGGATGAGCCGTGCGGGCCGCCTTGAAGTACAATTCTCACCGAGCGGCGGGTAGAAT
CCTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCACGATCCACTGAGATTCAGCCCTGTGTCGCTTCGATTCG
TCCCTCCCCCTCAAAC