Detailed information on CNT30518802


BLAST search results

BLAST vs Swiss-Prot:
sp|P20025|MYB38_MAIZE, E-value = 2e-07

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695504Juglans regiaOryza sativa29.3520.5885.84113forward
CNT30540820Juglans regiaBrassica napus31.6924.4584.43122forward
CNT30309276Juglans regiaCamelina sativa27.7936.2781.31107forward
CNT30131453Juglans regiaLolium perenne30.3931.282.91117forward
CNT30596691Juglans regiaOryza meridionalis32.9911.0885.83127forward
CNT30577574Juglans regiaOryza barthii32.9913.0385.83127forward
CNT30117389Juglans regiaOryza nivara29.3518.0285.84113forward
CNT30604447Juglans regiaOryza punctata32.9910.1784.25127forward

Expression of CNT30518802

Peptides detected in this lncRNA

>peptide 1 (29 aa)
PYHSAIPSCKQNIDYQSSSMVHSGFGKEG*

Sequence

>CNT30518802
CCTTACCATTCTGCAATCCCGAGCTGCAAGCAAAACATAGACTACCAGTCTTCTTCAATGGTTCATTCTGGTTTTGGTAAGGAGGGCTAATCGTAAGCTC
AAGGTTCAAGTCCGGACACCGTTCTTGAAGTACTACTGATCTTTTTGTGTCTTTCTCCCCAACCCCACTTTTTTCTTCTTCTTTGACTGCAGAGGCAGCA
AAAGATATGGTGGTTTCATCCTGAGCAGCCTCGTTGATTGGCCTTGAAGTTGCCACGTTTGAGGTCGGGACGGAGATAGTTAATCCAGCGGAGCCGGCAA
CTTTTGCCACATCGGAGAAGGCCAGCGGCTTTAGGGAGTGAGCGCCAGCACCCCTCGCCGTGAGCTCGGATATATGCGATAAGAC