Detailed information on CNT30518502


BLAST search results

BLAST vs Swiss-Prot:
sp|Q1KXQ8|NU1C_HELAN, E-value = 6e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30531354Juglans regiaEucalyptus grandis65.019.3393.17249forward
CNT30317759Juglans regiaCorylus avellana65.0112.2196.79249forward
CNT30619402Juglans regiaSesamum indicum65.0110.1194.38249forward
CNT30215974Juglans regiaHelianthus annuus65.2734.1591.6250forward
CNT30596717Juglans regiaOryza meridionalis64.7526.6787.9248forward
CNT3057989Juglans regiaAmborella trichopoda65.0147.4389.16249forward

Expression of CNT30518502

Peptides detected in this lncRNA

>peptide 1 (32 aa)
IRFDNLLLILLLLLVNQKVISHILLGKKLEKR*

Sequence

>CNT30518502
TATTCGGTTTGATAACCTGCTACTAATTCTTCTTCTGCTTCTGGTAAATCAAAAGGTAATCTCTCACATTCTGCTAGGGAAGAAATTAGAAAAACGATAA
ACTCTATAGGTTGACGCCACAAATTCCACCCCAAAAAATCATATTTTGATTGAGCCTCAACTATATCAACTGTACTTAAACTGTTAGATAGTAGAGATAT
TGATAATACACGTAGAGTTAATGGTATTTCATAACTAATCGATTGAGCATATCCTGACATAAGAAGTCTAATGGAAGCAATACTTGAAACCGCAATCCAT
AAAAAAACTTCAATATTGAGATCGGTTAAAACAAGACGATAGTCAAAAGGAATTACTAAATAATTTAGCAAAATGGATACGAC