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Detailed information on CNT30518292


BLAST search results

BLAST vs Swiss-Prot:
sp|O49169|EF1A_MANES, E-value = 1e-83

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30505987Juglans regiaNicotiana attenuata53.1674.1688.52244forward
CNT30287202Juglans regiaTriticum aestivum91.2958.2886.87419forward
CNT30146188Juglans regiaMedicago truncatula76.6944.8486.08352forward
CNT30598511Juglans regiaFraxinus excelsior10070.5186.06459forward
CNT30232362Juglans regiaAnanas comosus63.8351.3185.32293forward
CNT30721805Juglans regiaTriticum spelta45.7514.5488.57210forward
CNT30644842Juglans regiaCannabis sativa54.0361.3986.29248forward
CNT3024873Juglans regiaPopulus trichocarpa82.5767.288.13379forward
CNT30580076Juglans regiaEchinochloa crusgalli87.1530.2386.75400forward
CNT30726329Juglans regiaLupinus angustifolius95.8696.0785.68440forward
CNT3039699Juglans regiaMarchantia polymorpha60.3532.5584.12277forward

Expression of CNT30518292

Peptides detected in this lncRNA

>peptide 1 (65 aa)
SFTATFFTLKPTLSPGRASWRASWCISTDLTSVVSPVGPKVTTIPGLMTPVSTRPTGTVPMPPIL*

>peptide 2 (77 aa)
ILHGNVLHVEANIITRKGLLESFMVHLHRLNFSRQSSGAKGHNHTRLDDTSLHTSNWDSSNATNLVDVLEWQTEGLV*

Sequence

>CNT30518292
GATCCTTCACGGCAACGTTCTTCACGTTGAAGCCAACATTATCACCAGGAAGGGCCTCCTGGAGAGCTTCATGGTGCATCTCCACAGACTTAACTTCAGT
CGTCAGTCCAGTGGGGCCAAAGGTCACAACCATACCAGGCTTGATGACACCAGTCTCCACACGTCCAACTGGGACAGTTCCAATGCCACCAATCTTGTAG
ACGTCCTGGAGTGGCAGACGGAGGGGCTTGTCTGAGGGCCTCTTGGGCTCCTGGATCAAGTCAAGAGCCTCAAGGAGGGTGGGGCCCTTGTACCAGTCAA
GGTTGGTTGACCTCTCAATCATGTTGTCGCCCTCAAAACCAGAGATTGGAACGAAGGGGATCTTGTCAGGGGTTGTACCCAACCTTCTTTAAATAGGATG
AAACTTCCTTGACGATTTCATCGTACCTTGCCTTGGAGTATTTTGGGGTTGTGGCATCC