Detailed information on CNT30518096


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30526651Juglans regiaPhaseolus vulgaris18.5521.4889.0664reverse complement
CNT3093739Juglans regiaSolanum tuberosum20.8723.6887.572reverse complement
CNT30538642Juglans regiaBrassica napus42.3262.1384.93146reverse complement
CNT30261746Juglans regiaBrassica rapa42.3262.1384.93146reverse complement
CNT3015222Juglans regiaZea mays20.2923.6588.5770reverse complement
CNT30213027Juglans regiaHelianthus annuus33.9137.8686.32117reverse complement
CNT30155101Juglans regiaPrunus persica22.6114.0388.4678reverse complement
CNT30410045Juglans regiaPapaver somniferum18.5521.6290.6264forward

Expression of CNT30518096

Peptides detected in this lncRNA

>peptide 1 (30 aa)
KDGSAWTNPSGLYRVRETLTRYPSTVRSGG*

>peptide 2 (32 aa)
MPASQQIDAPTWVKGSRYQARPTTQSHCSIIKC

>peptide 3 (35 aa)
KRWFGLDKSIGPLSGPRDTDPLSFHCQERGVVAAL*

Sequence

>CNT30518096
AAAAAGATGGTTCGGCTTGGACAAATCCATCGGGCCTTTATCGGGTCCGAGAGACACTGACCCGTTATCCTTCCACTGTCAGGAGCGGGGGGTAGTCGCT
GCTCTGTGAAACCAGCCTGACGCATTGCCCCCATCCTCTAGGAAACACGTGACCCAAGAGCCTTCGCCCAAGCCACATGCCTCACACTCTCGACTTGGAA
CGGGCGGGCCGGTAATAAGCCGACGGAGGCCCAACCCGGATAGAATATGCCAGCGTCCCAACAAATTGATGCCCCCACGTGGGTTAAAGGCTCGCGTTAC
CAAGCCCGGCCAACAACCCAATCTCATTGTAGCATTATAAAGTGC