Detailed information on CNT30517903


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 3e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3098801Juglans regiaSolanum tuberosum3.6926.1785.2695forward

Expression of CNT30517903

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MSKCKICMSHPRCKYSIPRATPRAILYVFSQLRRILPSKEKM*

>peptide 2 (54 aa)
MTSASKSSFKYCSIASFTQFFLKIFCHLLNFRERVPYCHKVIVVLKKFFNGIIH*

>peptide 3 (36 aa)
MLSAAFGPGHDVRNIRSILQESSTSPASVVPTLTYI*

>peptide 4 (38 aa)
MEFLVQLLPHACILYERKHQSTIMRKKKTIRSSKHFYC*

>peptide 5 (60 aa)
MFIYFICTYVLNYFPSFFRSLRNLKWDISNLKWELYKGRFLFKRWKLLLNSSEIKLRVAI*

>peptide 6 (31 aa)
MRAHKFGHCILWLRLLVEMEILCCDWRRMKE*

>peptide 7 (35 aa)
MASYIDKCLLRHLYIRNATTNGVPSTVAAPCLYTI*

Sequence

>CNT30517903
GGTACAATTTTGCTAAGCCAAAGTTAGAAACCTTAGGGCTAAAATTCTCATCAAGAAGGATGTTGTGAGGTTTGATGTCGAAATGCAAAATTTGCATGTC
ACATCCTCGATGTAAATATTCAATTCCACGAGCCACCCCTAGAGCAATATTATATGTTTTCTCACAGCTTAGGAGGATACTTCCTTCCAAGGAAAAGATG
TAATTGTTTAGAGACCCATGTGGCATGAACTCGTATACAAGAGCACGCTTTGATCCATGAAAGCAAAAGCCAATTAGTTGAACTACATTAACATGATGAA
TCCTTCCAATGGTTGCCACTTCGTTTGTAAATTCTTGTCCGTTTGCTTTGGACTTGCCTAGCATTTTTACAGCTACATGACGTCCGCTTCGAAGAGTTCC
TTTAAATACTGTTCCATAGCCTCCTTCACCCAATTTTTCCTTAAAATTTTTTGTCATCTTCTTAATTTCCGAGAAAGAGTACCTTATTGTCATAAGGTTA
TTGTGGTTTTGAAGAAATTCTTCAATGGCATCATACATTGACAAATGCCTCCTTCGCCATTTATATATAAGAAACGCAACAACAAATGGAGTTCCTAGTA
CAGTTGCTGCCCCATGCCTGTATACTATATGAAAGAAAACACCAAAGTACAATTATGAGGAAAAAAAAAACTATAAGATCATCAAAACACTTTTATTGTT
AATTTCCTTAAGTATCGTCACCGTTTTGTTTTGGTTGAAATATAGTTACAATTCACAACTAGTTAATTACTGCCTTGCAAAATCCTACACAAATTAATAT
GTTCATATATTTTATCTGCACATACGTTTTAAACTATTTTCCTAGCTTCTTTCGTAGCTTAAGGAATCTGAAATGGGATATAAGCAATCTGAAATGGGAA
TTATATAAAGGAAGATTTTTATTCAAGAGGTGGAAGCTTCTACTAAATTCTTCAGAAATTAAGTTGAGAGTTGCCATTTAATTAATTTTATTCATTGTTT
CTGAGATCTATTTAAAACGATCAATATATGGGACCTAACGGTCCTAGCTACAGCTAACCCAATAATGCCAAGCTAGCACAAGGTTATATACATACCCTGG
CGGCCAGCTTGTATTATCACAAATTAATTAAGCTTATAAACACATGCAATCCAATTCCATCTATATATTCTCCATTTTCTGATATAGAAAGCATACCTAT
AAACAGAAGTAATCTTATGGTGTCGAGTCCTGGTTTGACAAAAAAGAAAAGAAAATATAAATCACATTAGCAACTGGAAACTTCAATTGAAAATCAGGGC
ATGAATATTACATTAATATTAATAATTAGCTAAACAACCATAAATTAATATCCACTTAAATAGATGGGTATTTTATTTTATTGGGTACACGCCCACTAAT
TAGAAGTTTTGTCTTAAAGATTATTATAAGTAGTTCAATATTAGTGTGGCCTTGGTGCGCCTGCCATTAGTTGTGCTAATTAAACAGAATCTGGCATATA
TAAGATAGATAATCAGCGAAAATACATGTCTGGTCAATATTTGTGAGAGTCAAAAAATAAAAGAAATCACTAGAAAATAGAGAAACGTGCATGTCAAATT
AGCAAAGTAATGACGATATATATATATATATATATATATATATATCTATCAACGTGTAATTAAAGATCTAACTAGAAATTGAATATTGGATAAGTAATTA
CTCGAAAAACCGGGAATGAACCATTGAAGCTCAAAACCAGATAAGAAGACATTGCGGAGGTCTGCACAGGAAATATTAATGTTGTCTGCAGCATTTGGTC
CTGGCCATGATGTCAGAAACATTCGCTCTATTTTGCAGGAATCCTCCACATCCCCCGCTTCAGTTGTGCCAACTTTGACATATATATAGCTTTTGGAATA
TTGGGATATTGATAAACTAGAGGAGTTTGAAGAAGACGCAGATCCGTTATTAGAGCATGTTGAAGAAGACGTTTCCAAATACAAATAGGAAGTAGAATTA
CTCTTGACTGGCTTTTTACAGTTCACAATAGCCACGCCCTTTGCAATAGTAGTACCATACCATGATTCATAGTCCATACCCTTTGCAGTATAAGTAATAC
CATACCCTGTTTCATAGTACAAACCCCGGCCCTGTAGCCGACTCAAATTGCTATAGTTTATAATAAAACGAGGGATGAAGGAGTAATTATCCTCCTGAAT
GCCCGAATCTACCAGTCGGATCGTTCGGTTATCGTAATTGAGTTGCTGCACGTAGTATTTTCCACCAAGATCAGAGTAGAACAGCAATTCATGGTTGTTC
TCGCATGAGAGCTCATAAGTTTGGCCACTGCATTTTGTGGCTTCGCCTTTTAGTCGAAATGGAAATCTTATGCTGTGATTGGCGCAGGATGAAGGAGTAA
CGGAATAGGTATCACAGTAGAATATCTTAAGGCAAAAGGTTTGAGGGAGTAGGAGTAGGAGTAGAGCAGCAATCATGATGACCATGACTCCAGAAGGGAT
GATCGACGTTATTCCTCTTGCGGCAATTAACACCATTGAGAGAGAGAGGATTTTGGGATAAGCTAGGCCGTGA