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Detailed information on CNT30517898


BLAST search results

BLAST vs Swiss-Prot:
sp|P36182|HSP82_TOBAC, E-value = 1e-140

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675624Juglans regiaSetaria viridis22.9832.9682.21208forward
CNT3019970Juglans regiaCitrullus lanatus14.1442.1183.59128forward
CNT30729348Juglans regiaCorchorus capsularis52.2752.2783.51473forward
CNT30381694Juglans regiaManihot esculenta52.8277.181.8478forward
CNT30526134Juglans regiaPhaseolus vulgaris46.0865.4677.94417forward
CNT30630919Juglans regiaVigna unguiculata46.9631.9177.65425forward
CNT30711421Juglans regiaGlycine max15.849.8384.62143forward
CNT30158908Juglans regiaPistacia vera52.2728.9581.82473forward
CNT30187977Juglans regiaSecale cereale21.2226.5983.85192forward
CNT30298225Juglans regiaTriticum aestivum17.3520.5285.99157forward
CNT30394033Juglans regiaTriticum turgidum23.8715.9683.33216forward
CNT30562110Juglans regiaActinidia chinensis18.3420.184.94166forward
CNT30314068Juglans regiaCamelina sativa55.3633.0580.44501forward
CNT3082269Juglans regiaBrassica juncea39.0154.4879.04353forward
CNT30606420Juglans regiaGossypium raimondii18.5629.4280.36168forward
CNT30652736Juglans regiaRosa chinensis14.4822.6386.26131forward
CNT30212676Juglans regiaHelianthus annuus15.840.2885.31143forward
CNT30624770Juglans regiaDaucus carota36.6952.5384.04332forward
CNT30688537Juglans regiaTriticum urartu12.649.3585.09114forward
CNT30477326Juglans regiaArabidopsis halleri24.7525.3483.04224forward
CNT30362691Juglans regiaSorghum bicolor44.240.4482.5400forward
CNT30704690Juglans regiaPrunus avium41.9918.782.63380forward
CNT3055928Juglans regiaAmborella trichopoda22.7623.4681.55206forward
CNT30323609Juglans regiaAsparagus officinalis47.2925.7181.78428forward
CNT30558289Juglans regiaPanicum hallii39.3460.6580.06356forward
CNT30551470Juglans regiaOryza brachyantha29.9462.380.81271forward
CNT30113681Juglans regiaFicus carica52.4965.2583.58475forward
CNT30724682Juglans regiaLupinus angustifolius25.6494.6985.78232forward

Expression of CNT30517898

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MHFLTRFFLITFKILFCCNISREMFNGRSSESTTPLTNPRYSGISSSQLSIMNTLRT*

>peptide 2 (29 aa)
IVLLQLPNGILINCINHKEHLVALLLKPL*

Sequence

>CNT30517898
CCATCGTACTCCTTCAACTGCCCAACGGCATACTCATCAATTGCATCAACCATAAAGAGCACCTCGTAGCCCTTCTTCTTAAGCCTCTCTAAGAATGGAG
AGTTCTCCACGGCCTTCTTGCTCTCACCAGTAATGTAGTAAATCTCCTTCTGACCCTCCTTCATTCGAGTCACGTAGTCTTTTAAACTGGTCAGCTCGTC
ACCGCTTTTCGTGGAGTGGTACCGGAGCAAATCAGCCAATTTGGCCCTATTCTGACTTTCTTAGAGAAAGCTTCATAAAACTTGTTGTAGTCCTCCTTGT
TTTCGGCAATCTCATTGAACATCTCAATGCACTTCTTGACAAGGTTCTTCCTGATCACCTTCAAAATCTTGTTCTGCTGTAACATCTCACGCGAGATGTT
CAATGGCAGATCGTCCGAATCTACCACACCCTTGACGAATCCGAGGTACTCGGGGATCAGTTCCTCGCAATTGTCCATAATGAACACCCTCCGAACATAG
AGTTTGATGTTGTTCATCTTCTTGCGTGTGTCGAACAGATCGAATGGAGCTCTCTTCGGAACAAACAGAATGGCCTTGAACTCAAGCTGACCCTCGACAG
AAAAGTGCTTGACAGCGAGGTGTTCTTCCCAGTCATTGGTCAAACTCTTGTAGAAGGAAGCGTATTCATCTTTGGTGATCTCCTCCGGCTTGCGCAACCA
AATGGGTTTCTGCTTGTTGATGAGTTGCCATTCGTGAGAAACTTCCTTAATCTCCTTCCTCTTCCTTCTTGGGTTCTTCGTCTTCATCATCACTGATCTC
CTTCTCAGTCGTCTTCTCGGTCCAGAGGTAAATGGGGTAACTGATGAACTCAGAATGCTTCTTCACAAGATCCTTAATCCTCCTCTCCTCCAAGTATTCC
AACTG