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Detailed information on CNT30517641


BLAST search results

BLAST vs Swiss-Prot:
sp|P29402|CALX1_ARATH, E-value = 1e-93

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30676366Juglans regiaSetaria viridis34.3947.3184.86185forward
CNT30377354Juglans regiaArabidopsis thaliana61.3449.481.21330forward
CNT30278532Juglans regiaChenopodium quinoa99.6348.7782.65536forward
CNT30728459Juglans regiaCorchorus capsularis46.14081.05248forward
CNT30629033Juglans regiaVigna unguiculata84.7673.7983.55456forward
CNT30709122Juglans regiaGlycine max24.7237.7885.71133forward
CNT30190468Juglans regiaSecale cereale50.1927.9281.85270forward
CNT30397803Juglans regiaTriticum turgidum42.7529.382.61230forward
CNT30561418Juglans regiaActinidia chinensis90.7148.4182.79488forward
CNT30144554Juglans regiaMedicago truncatula55.0234.5884.8296forward
CNT30264134Juglans regiaBrassica rapa49.8130.9178.73268forward
CNT30140632Juglans regiaLolium perenne28.6275.4987.01154forward
CNT30605054Juglans regiaGossypium raimondii62.2759.0885.07335forward
CNT30126269Juglans regiaCorymbia citriodora49.4470.1884.21266forward
CNT30686469Juglans regiaTriticum urartu28.6227.2685.71154forward
CNT30349705Juglans regiaEragrostis tef41.8232.181.33225forward
CNT30366134Juglans regiaSorghum bicolor25.8422.0387.77139forward
CNT30120413Juglans regiaCitrus clementina55.0236.5985.47296forward
CNT3038556Juglans regiaCucumis melo25.4617.3488.32137forward
CNT30149228Juglans regiaBrachypodium distachyon78.8189.2680.9424forward
CNT30585446Juglans regiaEchinochloa crusgalli25.4645.3685.4137forward
CNT30116414Juglans regiaOryza nivara33.0963.5782.58178forward
CNT30725707Juglans regiaLupinus angustifolius54.6553.3684.69294forward

Expression of CNT30517641

Peptides detected in this lncRNA

>peptide 1 (99 aa)
MPFPFISWIPLHWLLPHTTPRCNLTLWVISFWCLPFTIFLVIPIFWLCSLRIVDLLRLIIQPSFRFHSLLIFNFHGCILIPIIWLHCFWIWNFGPLIPVL

>peptide 2 (63 aa)
SFSASNFGFHAVSLYDSAAFSSPAMRILSNKMPSCIVQISMPMAAMGSKSGFSSSKYSGFGIS*

Sequence

>CNT30517641
TCTTTCTCAGCTTCAAACTTTGGCTTCCATGCTGTTAGCCTGTATGATTCTGCAGCCTTCTCATCACCCGCAATGAGAATATTGTCAAACAAAATGCCAT
CCTGCATTGTCCAGATCTCAATGCCAATGGCAGCAATGGGCTCAAAATCAGGTTTCTCAAGCTCAAAGTACTCTGGGTTTGGGATTTCTTGAGGTTTCCA
TATGCCCTTATAATTAGGGTTATCAATTAGAGGAGCATGCCATTTCCCTTTATAAGCTGGATTCCTCTTCATTGGCTTCTTCCACACACCACACCCAGGT
GCAACCTCACACTTTGGGTTATCAGTTTTTGGTGCCTCCCATTCACCATCTTCCTCGTCATCCCAATCTTCTGGCTTTGCAGCCTCAGGATCGTCGATCT
CCTCCGGCTCATCATCCAGCCATCCTTCAGGTTTCACAGCCTCCTCATCTTCAATTTCCATGGGTGCATCCTCATCCCAATCATCTGGCTTCACTGCTTC
TGGATCTGGAATTTTGGCCCGCTCATCCCAGTCCTCCG