Detailed information on CNT30517240


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 1e-37

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3094391Juglans regiaSolanum tuberosum48.0133.1886.21145forward
CNT30299532Juglans regiaTriticum aestivum30.4618.0482.6192forward
CNT30393705Juglans regiaTriticum turgidum30.4610.1182.6192forward
CNT30440464Juglans regiaAegilops tauschii30.4611.0882.6192forward
CNT30249161Juglans regiaAvena sativa30.4619.6283.792forward
CNT30665854Juglans regiaTriticum dicoccoides30.4617.4982.6192forward
CNT30344027Juglans regiaEragrostis tef30.4611.3984.7892forward
CNT30148202Juglans regiaBrachypodium distachyon31.7917.6182.2996forward
CNT30579413Juglans regiaEchinochloa crusgalli30.469.9184.7892forward
CNT3049718Juglans regiaCucumis sativus50.3329.1283.55152forward

Expression of CNT30517240

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MIHGQTITQQQSHTHKIHILYIIVHLTSHILACR*

Sequence

>CNT30517240
AAAAAGTTGAGCATCGATAAATTTAGCCATGATTCATGGGCAAACAATAACCCAACAACAATCACATACACATAAAATACATATATTATATATCATCGTA
CACCTCACAAGTCATATACTTGCTTGCCGGTGAACTTGACCTCAATCGGGTTCACCTTCTCCGGGTAAACACCGTCCTTGGGGTGCAAATATTGGACCTC
TCCATTGGGGAACACCCTGTAAAACTGGTACTTGATCTTGTACTTAGATCTCAACCTCGTCCCCAAAGCCAAGCACTGCTCTTTCCTAGCCAGTTTGAGC
AG