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Detailed information on CNT30517219


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30533222Juglans regiaEucalyptus grandis4.4225.2398.7882forward
CNT30317675Juglans regiaCorylus avellana4.4230.4895.1282forward
CNT30191267Juglans regiaSecale cereale4.3723.8296.381forward
CNT30224947Juglans regiaHordeum vulgare4.226.5393.5978forward
CNT30395161Juglans regiaTriticum turgidum4.221.9193.5978forward
CNT30309894Juglans regiaCamelina sativa4.237.3293.5978forward
CNT30467175Juglans regiaSaccharum spontaneum3.3426.598.3962forward
CNT30652446Juglans regiaRosa chinensis4.3726.2196.381forward
CNT30721855Juglans regiaTriticum spelta4.220.5393.5978forward
CNT30704991Juglans regiaPrunus avium4.5827.5197.6585forward

Expression of CNT30517219

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MHVIMRFLVLIVPIADESPSSPFVLRLIPILGFHRVEFRVCVCVLLPTQKVYRGRGGSYRVGWGYNNRL*

>peptide 2 (33 aa)
MCYYLNVFYGSTAGPLYSQIYVILGFRISDAKV*

>peptide 3 (44 aa)
MFSMDQQPGLFILRSMLFWVLESLMQRCRTGKKKTIRLVFWFYS*

Sequence

>CNT30517219
GCCTACTCAACCCAATGTTATCAACCTGAATCTCACTGACTATACAATGTATACATTAGGGTTTCTTCTTCAATTGCTATAAATTCTCGCAAAGCCTCCA
AATCGTTCTCTGCGCAGCCTACTCCGGACTACTAGGGTTTCGAAAGCGAGGGTGAGAAGGAACTTAGACACGGAATCACCATGAGGGCCAAGTGGAAGAA
GAAGCGCATGAGGAGGTTGAAGAGGAAGCGCCGAAAGATGAGGCAGAGATCCAAGTAGTTCTCTTACCAATAAATCGACGTTGTTTTGTGTCTAATCGGT
TTCTGATTAGAGAGTCGTAGTGTTTTCCATTTTTACGTTTGGATTTAATATCTGAAAGGTTGGAGTTTTGTGCTGTTGAATGGGATTTTGGTTTCTTCTT
AATGCTATGGTTACGGTAAGTAGTGTTGGATTTGATTTGTTCGTTATTTTTTAGCAAATGGGAATGCTTATAACTGAGTGTGCTTTGTCGGTGGTAATCT
TAGGACTAAACAAAGTTTGAAAGTGCACGGTAGCTGTTTTGATTTTAGTGTTCCATTAGTTCCGAGTTTATTTAAGGAGTTAGAGCAAACATTAGCTGAG
AATATGGGCCACGAATCCTGTTTTACGCCATTTTGAAGCTATTCCTTTATAAGGTTTGATTACTTGTGGTTCTGAGAACTTGATGCATGTCATTATGAGG
TTTCTTGTACTAATAGTGCCCATTGCTGATGAGTCACCATCTTCCCCATTCGTTTTGCGACTGATACCAATATTGGGTTTCCATCGGGTTGAGTTTCGAG
TTTGTGTTTGTGTTTTGCTTCCCACCCAAAAGGTTTACCGAGGTCGCGGGGGGTCATACAGGGTGGGGTGGGGATATAATAATAGACTTTGAAGAATGTA
GATGGCGTTGTTTTAGTGCGGTGTGATGTGCTACTATTTAAATGTTTTCTATGGATCAACAGCCGGGCCTCTTTATTCTCAGATCTATGTTATTTTGGGT
TTTAGAATCTCTGATGCAAAGGTGTAGAACAGGAAAAAAGAAAACAATTCGTTTAGTTTTTTGGTTTTACTCATAAGAACTGTAATTGCAACCTGAACTT
CTTGTCATGATACTTGACGGGGTTTTCTTTCTGACGTAGCCTTTCTGTTGTGCGAACTTTTACAGCCGGTTTTGATTCATCTCGTTACTGTTCACAAATT
TCAGCTCATAAATTTCATTACTATTCATAAATTTTTTCTTCACAAATTTCAGCTCATAAATTTCATTACTATTCATAAATTTTTTCAACTCATCTCATCA
TCTATCAAACGGAGTAGACCAGTGATATTTTCTAGATCTTTCAAAATCGAGCGGATATATTTCTTCCTCTGAAATATAGTGGGAGTGATCAATTTAATCC
CAGGAATTCAATTTTTGCTGGTTTTAGAAGTTATGTTTATCTAAATGTAGTATGCGTTTCATGAGGATGTCACAAGCAGCCAAAAGAACTGCTTGAAGCA
ATTACGTCGAGCACTTGACCGCTAAGCTGTTTAAAAGAAATCAAAACCAGCAAAAATTGCCCAACCGTCAAATGAAACAATTTCGTCAGAACTCAACCAA
ACAATGGAGAAATATTTAGCGGAAGTCTAATCAACGATTCATTCTGATCGATTTCACGTTTAACTTGTCGTTTCCTACTTTTATGTTTCAAAGACTTATC
TAAACTAAGGAGAAGTAAGGTCTACAAAAGAATTATAAAATAAAGAATAGAAAATAACTTAATTTGATTTATAATGTAGATCTAACAACAGCTTAATTAT
GATGTACCACATCAAGCAATTTTCATGACTAAAATGGAATATGATTTTTCATGAC