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Detailed information on CNT30517065


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692619Juglans regiaOryza sativa57.5970.7684.43167forward
CNT30530261Juglans regiaEucalyptus grandis68.6276.2586.93199forward
CNT30316727Juglans regiaCorylus avellana73.4517.1992.02213forward
CNT30618048Juglans regiaSesamum indicum24.4819.7887.3271forward
CNT3070514Juglans regiaQuercus suber70.3483.6182.84204forward
CNT30221766Juglans regiaHordeum vulgare28.6230.1886.7583forward
CNT30566887Juglans regiaActinidia chinensis53.4550.3284.52155forward
CNT30586912Juglans regiaMusa acuminata67.5957.9980.1196forward
CNT30131974Juglans regiaLolium perenne20.3419.3486.4459forward
CNT30127153Juglans regiaCorymbia citriodora59.3163.2486.05172forward
CNT30343741Juglans regiaEragrostis tef67.5980.3382.65196forward
CNT30570768Juglans regiaVitis vinifera70.6941.2584.88205forward
CNT30704146Juglans regiaPrunus avium71.3829.1583.09207forward
CNT3022423Juglans regiaPopulus trichocarpa41.0311.5881.51119forward
CNT30329110Juglans regiaAsparagus officinalis24.1413.7587.1470forward
CNT30331317Juglans regiaDioscorea rotundata5044.6285.52145forward
CNT30558432Juglans regiaPanicum hallii54.8354.6481.13159forward

Expression of CNT30517065

Peptides detected in this lncRNA

>peptide 1 (82 aa)
KRHQYLPEEDFVCERAIDVGGVEEGNAGSVDDVVDESNHVFFGLGRAIESGHAHAAQPLRRHLQSLRTQLYPPNSLRHFRSV*

>peptide 2 (30 aa)
MSEVSRKVTPAVWTTWWMRAIMSSSGLGGP*

Sequence

>CNT30517065
AAAAGGCATCAGTACCTTCCCGAGGAGGATTTCGTTTGTGAAAGGGCCATAGATGTCGGAGGTGTCGAGGAAGGTAACGCCGGCAGTGTGGACGACGTGG
TGGATGAGAGCAATCATGTCTTCTTCGGGCTTGGGAGGGCCATAGAAAGCGGACATGCCCATGCAGCCCAGCCCCTGCGCCGACACCTCCAGTCCCTGAG
AACCCAGCTTTATCCTCCCAACTCTTTGCGCCATTTTCGATCGGTGTGAGCATTAACTGAGGCAGTTGACCAACACAGTTTATATGCAAG