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Detailed information on CNT3051689


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695408Amborella trichopodaOryza sativa15.6826.4385.85106forward

Expression of CNT3051689

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MKMQKWSAPSLSRTKLWKLGRSIKAAELRKPQQI*

>peptide 2 (40 aa)
MVSSLIIKNKAVEIGQIHKGCRIKKTTTNLRTHTNSQINS*

>peptide 3 (46 aa)
HFLILIITDFFLSGLLSPEVDGVANEFRVLLDQVLEPPLFKVILLQ*

Sequence

>CNT3051689
TCCACTTCCTCATCCTCATCATCACTGACTTCTTTCTCAGTGGTCTTCTCAGTCCAGAGGTAGATGGGGTAGCTAATGAATTCAGAGTGCTTCTTGACCA
AGTCCTTGAGCCTCCTCTCTTCAAGGTAATCTTGCTGCAATAACAACAAGGAAGAGTTAGTTAGATAGTAATAATAACAACAATAATAATAAGGCAACCA
TTGCCATGTCAATAGATAGGTAGATAGAAATTTGGTGCGTAGAGAGAGAGAGAGAGAGAGAGAGGTCCTCTTCTCCAGAATTCAGCAAAACATAAATTGG
ACTAATCTGGCCCCACTTTCTTCCAAAACTGAGGTTCTTTTGAATCACTATTACCCAACAAATTCATTTTTAGCCCAACAAGATTTTAGCAACTGATCTA
TGAAAATGCAAAAATGGTCAGCTCCCTCATTATCAAGAACAAAGCTGTGGAAATTGGGCAGATCCATAAAGGCTGCCGAATTAAGAAAACCACAACAAAT
TTGAGAACTCACACAAATTCACAAATCAACTCTTAGATCTTAATTGGCTTTTCAAGTATAATAAAACTCAAACGACAGCAGCAATGGTAGGAAAACCTGA
GGGAGCGAGAAAATGAGGTAGCCAAGGAAGCACATGGGCATTATAATGCCCAAGCAAACAATAGAATCAACGCAAG