Detailed information on CNT30516858


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30506120Juglans regiaNicotiana attenuata47.3234.785.71203forward
CNT30312132Juglans regiaCamelina sativa85.0856.3381.92365forward
CNT30366537Juglans regiaSorghum bicolor58.5128.7881.27251forward

Expression of CNT30516858

Peptides detected in this lncRNA

>peptide 1 (71 aa)
LMENKMGMLVNMKVRSGCKMEKSGCRMEKSGCRMEKWGCMQVKWGCKLVKWGYSSVMLGCKWEKWGYSWER*

Sequence

>CNT30516858
GCTTGATGGAGAATAAGATGGGGATGTTGGTGAATATGAAGGTGAGGTCGGGCTGTAAGATGGAGAAGTCGGGCTGTAGGATGGAGAAGTCGGGCTGTAG
GATGGAGAAGTGGGGCTGTATGCAGGTGAAGTGGGGCTGTAAGCTGGTGAAGTGGGGCTATAGCTCGGTGATGTTGGGCTGTAAGTGGGAGAAGTGGGGC
TATAGCTGGGAGAGGTAGGGCTGTAGCTAGGAGATGTGGGGCTATAGCTGGGAGAGGTGGGCGAGTAAGATGGACTTGTAGGCGAATAGGCAGGACTGGT
TGGACTATAACCCGGAGAACTAGGACTATAAGTAGGGGAAGTGGGGCTATAGCCGGGAGAGGTGGGACTATATCCAGGGGATGTAGGACTATATCCTGGG
GATGATGGACTGTAGCCAGGAGATGATGG