Detailed information on CNT30516848


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30318042Juglans regiaCorylus avellana14.1930.3385.9464forward
CNT30381084Juglans regiaManihot esculenta62.3126.7977.94281forward
CNT30157112Juglans regiaPistacia vera21.2924.1886.4696forward
CNT30570403Juglans regiaVitis vinifera22.1713.0784100forward
CNT3033485Juglans regiaTheobroma cacao19.7321.0484.2789forward

Expression of CNT30516848

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MQVLFQEEKSYVGIIMELVLRGSIIILERISLWLYYNMHRLSRVHPDTFASNIHMGATSGLSFSSINIYTTLPYIDRSAFL

>peptide 2 (92 aa)
SSPLMPGFSHTLIVFSIMSASTDLGFTENVFRISGSLLDEKGIDSATWRGKKVASFEFLVKSKFIFVPGCKFFSKKKRATLGSSWSWFSVAA*

Sequence

>CNT30516848
CTTCCTCTCCTTTAATGCCCGGCTTTTCACATACTTTAATTGTATTCTCCATCATGTCAGCTTCTACTGATCTGGGTTTCACTGAAAACGTGTTCAGAAT
CTCTGGCAGCTTGTTAGATGAAAAGGGAATTGATTCAGCAACTTGGCGGGGCAAAAAAGTTGCTTCGTTTGAGTTTTTAGTGAAGAGCAAATTCATTTTT
GTGCCAGGATGCAAGTTCTTTTCCAAGAAGAAAAGAGCTACGTTGGGATCATCATGGAGTTGGTTCTCCGTGGCAGCATAATTATACTGGAACGGATTTC
CCTTTGGTTGTACTACAACATGCACAGGCTTTCCCGTGTCCACCCCGACACCTTTGCCTCCAACATTCACATGGGTGCCACCTCCGGGCTTTCCTTTTCC
AGCATCAACATTTACACCACCCTTCCCTACATCGACAGAAGTGCCTTTCTC