Detailed information on CNT30516799


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30372926Juglans regiaArabidopsis thaliana6.1424.7487.3795reverse complement
CNT30164954Juglans regiaPistacia vera5.9430.0790.2292forward
CNT30193415Juglans regiaSecale cereale10.7229.5483.73166forward
CNT30371226Juglans regiaOryza glumipatula5.4329.4788.184reverse complement
CNT30578338Juglans regiaOryza barthii5.4323.0888.184reverse complement

Expression of CNT30516799

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MRRFESCIPFHLKISLSIFCRPKWAINIYIYIYIYMYIFIITN*

>peptide 2 (44 aa)
ENLPQTNANSFFEVCPNSILPRIMIVPPKLIFFAHLYLISSSLI*

>peptide 3 (63 aa)
MKILLVRCHRVVFVASIFWYCISGWRRTSSVSESWGFNFFLLKFVLRNQDLGTFGHFFCMLLV*

>peptide 4 (37 aa)
MNWIQRKIYLYNVTFGLYMLDWWERYLFSILYFLPFS*

>peptide 5 (39 aa)
MAYESFLAWLVPSAISTKTNFPLYMFLCLSSLILYQILW*

Sequence

>CNT30516799
TGAGAATCTTCCTCAAACAAACGCCAATTCTTTCTTTGAAGTCTGTCCAAATTCCATCCTGCCTCGGATTATGATTGTACCCCCTAAATTGATTTTCTTT
GCCCACCTTTACCTTATTTCCTCATCCTTGATTTGAATCCCTAGTCCCTACCATTTTCCCCCACGCACACCACCGTTGACCAACGCACCGTAACGTTCCG
AGCTCATTCGGACGATTTGCCCATCATCCAGACGATTCCTCGTCTCCTCCCTCTCTTTAGGTTTCGAGTCTGATCTGAGGTACTTCTCGTTTTCCTACTT
TCAAAGAGAATGAGGAGATTTGAATCATGCATTCCTTTTCACTTAAAAATTTCTCTCAGCATATTTTGCCGTCCTAAATGGGCCATTAATATATATATAT
ATATATATATATATATGTATATATTTATCATAACCAATTGACTGACGGAAATAAGATTACAACCAATTTTCAATTGGTATACTATTTAACTATATGATTA
GTGTTCATAGGTTTCGGAAGTTATGAACTGGATTCAGCGCAAGATCTACCTTTACAATGTCACTTTTGGGCTCTACATGTTGGATTGGTGGGAGCGTTAT
CTTTTCAGTATCCTTTATTTCCTCCCTTTTTCCTAAGATCTGATCAGATTCACGTATGCTCTTCTACTTATTGTTACGGATCGACCCTAGATTTTGCTTA
CTTACCTATAATTGTGATGCAATATTGTACTTCTCGTAAACTGACGAAACTGTGGAATTGATTGTGTTTAATTTTGGATAACTTTTACGAATTAGACCTA
TCGCCTAAAGAATGAAATGAAAATTCTGCTGGTCAGGTGCCATAGAGTTGTTTTCGTTGCTTCAATCTTTTGGTATTGTATATCAGGGTGGCGTCGAACC
AGCAGCGTAAGTGAGAGCTGGGGTTTTAATTTTTTCCTTCTAAAATTCGTTTTGCGAAACCAAGATTTGGGAACCTTTGGTCATTTTTTTTGCATGCTCC
TAGTGTAATCTAAGCAACTTTATTTTTTGGGGGGGCAAAAATAGCAGTAAATTGAGCTATGGCTTACGAAAGTTTTCTGGCCTGGTTGGTTCCATCTGCC
ATCTCAACCAAAACTAATTTCCCCCTTTATATGTTTTTGTGCTTGAGTTCCTTAATATTGTACCAGATACTTTGGTGATCGTCTTGATGTGGTTCATTTT
TTACAACGGATCACGATATGTAACTGAGTTCTGCAAGAGAACTCAACAGTGAGGGACATCCCGCCCATACAGCCAGCAGGGAGGATGGCACTGTTGGCAG
AGACCGTCTGGCAAAAATGCGGCAGGCGTAAAGCGTGGTAGGCCTGCACCGGGGGAGCATAGCAAAGAGAGGAAAGGGAACCCTGACGGTTGAAGGGCCA
AGGGAGGGCTGGGTCATTTGATGGAAATGGAAGGGTTTTACCTATTAGAAAAGGCACTATGAAGTAAAGGGAAGTGCATAAATTCTTGGAAAAAGAGGGA
GCGAGCTTGTATAAAAATGAGCAATATTATATATAGTTATGAAGTATG