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Detailed information on CNT30516757


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639966Juglans regiaNymphaea colorata31.9210.5379.75158forward
CNT30730016Juglans regiaCorchorus capsularis41.8231.2783.09207forward
CNT30629841Juglans regiaVigna unguiculata21.8218.4689.81108forward
CNT30507460Juglans regiaNicotiana attenuata38.3862.7181.58190forward
CNT3094368Juglans regiaSolanum tuberosum41.4179.1580.98205forward
CNT3084712Juglans regiaVigna radiata29.952.381.76148forward
CNT30238125Juglans regiaBrassica oleracea23.039.7384.21114forward
CNT30172489Juglans regiaTrifolium pratense22.228.5386.36110forward
CNT30217112Juglans regiaKalanchoe fedtschenkoi21.2110.9581.9105forward
CNT30359901Juglans regiaLactuca sativa20.6115.0484.31102forward
CNT30154501Juglans regiaPrunus persica30.5148.484.77151forward
CNT3031830Juglans regiaTheobroma cacao36.3649.3286.11180forward
CNT3037832Juglans regiaCucumis melo33.1319.4881.71164forward
CNT30725094Juglans regiaLupinus angustifolius70.154.4778.39347forward
CNT3049017Juglans regiaCucumis sativus33.1316.7282.93164forward

Expression of CNT30516757

Peptides detected in this lncRNA

>peptide 1 (42 aa)
MPLRSGLTAVRYAGRFERYQAINGLDVTGVSRLPMNGSPLMG*

>peptide 2 (56 aa)
CDENSNIQVHDEGSPNLKYNNVGHLVYNFTFASQLRPCMLRRETIDVAGGKNHLKK*

Sequence

>CNT30516757
AATGCGATGAAAATTCAAATATACAAGTTCACGATGAGGGAAGTCCAAATTTAAAATACAACAATGTTGGTCACTTAGTATACAATTTTACATTTGCTTC
CCAATTAAGACCATGCATGTTGAGACGAGAGACCATTGATGTGGCCGGGGGGAAAAATCACTTGAAGAAGTAAGGAAGGTCCAAGACATACAGAAGGAAG
TAGGCCCAAGTGACACCGGAAATCCCGCCGAAGAAGAACCCACCGGTGAACTTGGCCCATCCGTCGGCAGTTTGCAGCTGGTCCAGTCTTGACGAATGGT
CCAACAAGGAGGAATCCATGGGCTAGGCCTACTTCAATGCCCCTCAGAAGTGGGCTAACTGCCGTCCGATATGCCGGAAGGTTTGAGAGATACCAAGCAA
TCAACGGGCTCGATGTCACTGGAGTCTCTAGGCTTCCAATGAATGGGTCACCGTTGATGGGTTGAATAACTTGGAAAGTTGGCTGCAAAGTAAAT