Detailed information on CNT30516721


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696398Juglans regiaOryza sativa5.7420.7989100reverse complement
CNT30285980Juglans regiaTriticum aestivum3.6722.1595.3164forward
CNT30220732Juglans regiaHordeum vulgare3.6726.0295.3164forward
CNT30398225Juglans regiaTriticum turgidum3.6721.7795.3164reverse complement
CNT30363124Juglans regiaSorghum bicolor5.7444.0586100reverse complement
CNT30550626Juglans regiaOryza brachyantha3.5621.1691.9462forward

Expression of CNT30516721

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MSSEFLENTSEKRKTNSKLKEKRCLRRGKFSMGGSRLQNVQKVWHMGFTWMSVILTCSENGKSGGQRISLLTHWPH*

>peptide 2 (67 aa)
MRRGIPESRKNGWSATEEHADGERERGELIDIEEEGRASWLKQGEGSAQMDLMGRLGAAGFWLGKNP*

>peptide 3 (60 aa)
PLPLGLWIAEFTFNARTPELSSSILTSDISWSCHQKPSPIDRTFHHQHLEKHLSRCSKLI*

>peptide 4 (29 aa)
MRLVSFFPFFLCSSNYIKVNKYKWCGRRT*

Sequence

>CNT30516721
CCGCTTCCACTTGGGCTTTGGATAGCTGAATTCACTTTCAATGCTCGAACTCCAGAACTAAGCTCAAGCATTCTCACTTCTGATATCTCCTGGTCCTGTC
ACCAAAAACCTTCCCCCATTGACAGAACGTTCCACCATCAACACTTGGAAAAGCATCTTTCAAGGTGTAGTAAGCTTATATGAAGACTATTTTAAAAAAC
TTAGATTCATGCCATAAACTTATGCTATTTTTTGCAATTACGAGGAAATGGCCTTAATAACCTGAATTGAAGTGGTTCATCAATGGAGATATATCAAGTT
CAGGCAGAAGTTACAGAAGGTCATTAGAAGTTTCATGAGGCTAGTGTCTTTTTTTCCTTTTTTCTTATGTAGTAGCAATTATATTAAAGTCAATAAATAC
AAATGGTGCGGTAGGAGAACCTGACAATCACTCCAAAGCAGCTAGCCCAAAGTGAGAAGCCCGATTGAAGCAGTTATTGTTGAACTTTAGTCCAACATTG
TCGGTAGGAGCTCAAAGCTCCTAGCAAAAACACACAAAAAGTAGAGATTCTGTGAACCATCCTCTATAAGGAACTGGATCTAGCACTGATGAGGATATGG
TGGAGCCGGACACCAGAGGTTCTCAGCAAGACACATAGTCACGCAGAGTTTGGTGGATTGGCGCAAATATGAGCTCCGAATTCCTTGAAAATACAAGTGA
AAAAAGAAAAACTAACAGTAAATTAAAGGAAAAGAGGTGTTTGAGAAGAGGGAAATTCTCTATGGGTGGCAGTAGGCTGCAAAATGTCCAGAAGGTGTGG
CACATGGGGTTCACGTGGATGAGTGTTATTCTCACGTGTTCAGAAAATGGGAAAAGTGGTGGACAAAGAATCAGTTTGCTGACGCATTGGCCACACTAGC
ATCCATGATCAGTTGAAAGACACTTGTGTGTTGAAGGTGGTTGGATAAGTTGGTGCCTTTTCCATCTGGTGAAACTGATGATGATACTTTAGCCAGTGGA
ACACCAAGCTCATCAAGCAAGCTCTCAAGAGCACCTGTCTACTTGAGGGAAGGTGTGAATCCTTTCTTCTTTGAATAACAATCTGGAATGCGACGTGGCA
TACCCGAAAGCCGTAAGAATGGTTGGTCAGCCACAGAAGAACATGCTGATGGAGAGAGAGAGAGAGGAGAGCTGATAGATATAGAAGAAGAAGGGAGGGC
TAGTTGGTTGAAACAGGGGGAGGGCTCTGCCCAAATGGACCTCATGGGTAGACTGGGTGCTGCTGGTTTTTGGTTGGGAAAGAATCCTTGAAGCCGTGTT
CTTTTGAAGTTACAAGTCTAGCCTTTGCCTCACTGAGGTGAAAGAAACATAAACCTCATTTATCTACTGTAATGGCTCTCTCTTTTAGAAAAGTTATAGA
AGAATTTTTTGTGGGTAAGTTTCTGAAGAAGCAGTAGGAAGCAGTAGAAGTATGAAGAAATTGTGGGCTTAACGGCTATTTGAAGATTAACGGTTATTTG
AAGATTGAAATGGTGCGTTTAAGTTTTAAGAAGTGAAACGGCTACTTGAAGCGGTGCGTTGCGTTTAATGATACGGCGCGTTTTGGCAATTGTAAATAGT
CGTTGTTTTTAGTTGATTAGTTGTATTAAACGGCTGCGTTTTAGTGTGTAGCCTTAGTATAAATAACAGGCTCTTGTAAATGGAAGGGAACTAGAAAATT
TACGAATTGACTTTCATTGTTTGTAAGGAGTTTGGAGATTAC