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Detailed information on CNT30516695


BLAST search results

BLAST vs Swiss-Prot:
sp|P30924|GLGB_SOLTU, E-value = 7e-112

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30694476Juglans regiaOryza sativa26.6116.8681.61174forward
CNT30492050Juglans regiaOlea europaea47.465.9681.29310forward
CNT3045078Juglans regiaPrunus dulcis30.8965.1689.6202forward

Expression of CNT30516695

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MISINTRRPKLWALSIKYFRSSGVPDLLLTAKKFVT*

>peptide 2 (84 aa)
INPLVRNGHCQAVIKTNSPLRDRSTKPWHTRNIFSYDSCIRQNIMNQSVCQHQINNSIDICCLTKILVIIPRKCHIYSMVMIQH*

>peptide 3 (36 aa)
NQSTCQEWPLPGGNQNQFPPQRQVDQALAYQKHLQL*

Sequence

>CNT30516695
AATCAATCCACTTGTCAGGAATGGCCATTGCCAGGCGGTAATCAAAACCAATTCCCCCCTCAGAGACAGGTCGACCAAGCCCTGGCATACCAGAAACATC
TTCAGCTATGACAGTTGCATCAGGCAAAATATTATGAATCAGAGTGTTTGCCAGCATCAGATAAACAACAGCATCGACATCTGTTGCCTCACTAAAATAC
TCGTTATAATTCCCCGTAAATGCCATATCTATTCCATGGTGATGATACAACATTGAAGTTACTCCATCGAATCTAAAGCCATCAAATCTAAACTCTTCAA
GCCACCACTGTAAGTTGGATAAAAGGAAGCGAAGTACTTCCCAATTGGCATAGTTAAAGAGCCTGCTATCCCATAACTTATGGTAACCACGATCTCCATT
GTGGAAGTAGGACTCCTGCCATCAGTCGCATTGTTACTTGTATGACTGTGAATGATATCCATCAATACTCGTAGGCCTAAGCTATGGGCCTTATCAATTA
AATACTTCAGGTCCTCTGGAGTCCCGGATCTACTGCTTACAGCGAAAAAGTTTGTAACATGATACCCAAATGATGCATAATAGGAGTGCTCCATCACAGC
CATCAACTGGACTGTGTTATAGTTATTTGCTCGAATACGAGGCAGAATCTCATC