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Detailed information on CNT30516347


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3069623Juglans regiaQuercus suber22.2934.2188.46156forward
CNT30120561Juglans regiaCitrus clementina22.4327.6985.35157forward

Expression of CNT30516347

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MVMMGLERLLMTLKSKIRSLKMKKPYDKIEKSESMRIEIRSKKARRLIEKTLKIADKDSSKTSTSITLAF*

>peptide 2 (54 aa)
MYISCIYGVYLSSTIWIVLRIREVIYNSVHSHLHASLCKAIALRYCYIILTNYIH

Sequence

>CNT30516347
AAACGATTATATCTCTTAGCTAGCTAGCTATGGTTAATTCGGTCTTCCTCGCGTTCCATCCATTAGGGTCAACAAATTAACGTTTGCTTTTTTTATAATT
TGCCATCTACCTCAACCAGCCTCTTCGCTCTCTGTGATTTCAGCTAGCGATGGTGATGATGGGGTTGGAAAGACTGTTGATGACTTTGAAATCTAAAATA
AGGTCCTTGAAGATGAAGAAACCTTACGATAAGATCGAAAAGAGTGAGAGCATGAGAATTGAAATAAGAAGCAAGAAGGCTCGCAGGCTTATTGAAAAGA
CTCTGAAAATAGCAGATAAAGATTCGTCCAAGACCAGCACTAGTATTACTCTTGCCTTTTAAGCAATTCTCGTCCAATGATTGAAATAAAAAGCTGGCAC
TACTTATAAATTTCTCTTTTTGATGTTTATTGCCGTTCATATATAAGAGATGACGCAAGGATTTTTGCCCTTTTCTCTCCCTCTCTCTCTCTCTCTTATA
TAAATATATATATATATATATATATATATATATCATGTATATATCATGTATATATGGTGTGTATTTGTCTTCCACGATTTGGATAGTGTTGAGGATTCGA
GAGGTGATATATAATTCTGTTCATTCTCACTTGCATGCAAGCCTTTGTAAAGCCATTGCTTTAAGATATTGTTATATAATATTGACCAATTATATTCACG