Detailed information on CNT30516020


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30550215Juglans regiaIpomoea triloba36.472.0387.193reverse complement
CNT30405603Juglans regiaBeta vulgaris48.6316.2386.29124reverse complement
CNT30198977Juglans regiaPisum sativum38.045.2184.5497reverse complement
CNT3044322Juglans regiaPrunus dulcis23.535.379060reverse complement
CNT30540371Juglans regiaBrassica napus43.9218.5484.82112reverse complement
CNT3060130Juglans regiaArabidopsis lyrata205.5690.251reverse complement
CNT3083474Juglans regiaBrassica juncea43.923.3584.82112reverse complement
CNT30655378Juglans regiaRosa chinensis51.768.8987.88132reverse complement
CNT30357951Juglans regiaLactuca sativa40.3910.9588.35103reverse complement
CNT30411335Juglans regiaPapaver somniferum52.5515.5384.33134reverse complement
CNT30574575Juglans regiaVitis vinifera42.757.1490.83109reverse complement
CNT30336888Juglans regiaCynara cardunculus39.613.1685.15101reverse complement

Expression of CNT30516020

Peptides detected in this lncRNA

>peptide 1 (35 aa)
KVLYEMGRVAENVARRAISIAGSKMPIRTQLIISG*

Sequence

>CNT30516020
TAAAGTACTTTATGAAATGGGCAGAGTAGCAGAAAATGTAGCCAGAAGGGCTATTTCAATAGCGGGATCCAAAATGCCTATACGTACTCAATTAATTATT
TCAGGATAGGAATATAGAACCAAAGGAAAGAAGTCTTTGGAATGAAAAAAAAAAACAATTGTAGGTTTCTTTTTATTTATTTTGGACAAACAATATATAT
ATTTTTTTAATTCGCCCCTTTGCATCAAAAGAGTAAATAAAAAAAATGATATGAT