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Detailed information on CNT30515949


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9MAI5|ERF79_ARATH, E-value = 3e-22

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30564047Juglans regiaActinidia chinensis7.0822.7780.77130forward
CNT30585986Juglans regiaMusa acuminata8.2722.3986.18152forward
CNT30234912Juglans regiaBrassica oleracea5.2820.8685.5797forward
CNT30474096Juglans regiaSaccharum spontaneum8.2739.987.5152forward
CNT30214766Juglans regiaHelianthus annuus6.823.581.6125forward
CNT30572283Juglans regiaVitis vinifera8.0631.3682.43148forward
CNT3023179Juglans regiaPopulus trichocarpa5.7720.9183.96106forward
CNT30116505Juglans regiaOryza nivara8.7621.9680.75161forward
CNT3051215Juglans regiaCucumis sativus8.9827.1483.03165forward

Expression of CNT30515949

Peptides detected in this lncRNA

>peptide 1 (47 aa)
PDVSHEGFLLREAAPPHHTTPQMLLSIPLRPCVVFHSFYIFYFIFLN*

>peptide 2 (51 aa)
PRRESRGFSLERGSAPTPHHTTNASLNPAPSVCCVSQLLHILFYFFKLNPI*

>peptide 3 (37 aa)
MNRSRCGPHCQRFGGNPSPLDRTCTNRGGSRSYSRTR*

Sequence

>CNT30515949
CCCAGACGTGAGTCACGAGGGTTTTCTCTTGAGAGAGGCAGCGCCCCCACACCACACCACACCACAAATGCTTCTCTCAATCCCGCTCCGTCCGTGTGTT
GTGTTTCACAGCTTTTACATATTTTATTTTATTTTTTTAAATTAAACCCAATTTAGTGCGAGTTTCCGTACGTGTTGTGGGCTCCTCTTGTGACGCAAGC
ACCTAGACTTTCCTAATCGTAAACACCCCCATCAAAAACTGCACGTTTGCGCAGAGAGTTTATGAGAGACACAAATCTTCGTTCTTGCGCAACCACAACC
TCGAATCTAACGTGTGGAAACCAAAAATAGTAAAAACCGTGTTTGGGGGGAACGAATATGAGCGAAAGACTTGGATTTTAACGATTGTTTGGGTGCTGGG
AAACGAGAATGTTAGGTCACCAGTTGAATGTGCGTTCCGTTATAATTGCCAAACGAGGGAAATGGAGAGAGATAATGGCACAACAAAATTTTTGACTTTT
TAACTTTCTTTTCAAAGGTGCAACATACAACACGTACTAGCAATAATGGCTGAACAACAGTGAGAAGCCTAGATAGATATCTCAGTTGCAAAAATAAGGG
AGAGCTTGGTTATCTATTTACAAAACGGAGCAGTCATCATATCAGTGAATCCATTAACCAAGTCAGCTAGCTTTCTCCAAACTAACGAGATCCACTTCTA
TCTCGATCTTAACCCAAAACAAAGGTAAGAAACTGAGAAATAAACTCGGATACTGAATCTAACGTCCGGAAAACTCGGATCTTCGCCTGCGATCAGGTGG
AATTTGAAGAAATCAGGCAACCTCCGGTGGAGGGAGATTGAGGTCAAGGTCGAGCAGTCTTTGGGTTGAAGGCTGGTGGAAATCGACGACGGAGGATGAA
TCGGAGTCGCTGTGGGCCCCACTGCCAACGGTTCGGAGGAAATCCGTCTCCGCTCGATCGAACCTGCACAAATCGCGGTGGTTCCCGCTCATATTCGCGA
ACGCGTTGAAAAAGTAGATCGGGCGCACAGCCGTGACCACGGGAAACGCGACCGTAGGGCCGACCGGGTACTGAGCAGAGCCTCCCAGAGTGAGATCGAG
TGGCTGGGGCGTCGTGGAAGAGGAGTCGACAGTGCTGCTCTGGCTGGGGCTGCGGGTGGTGGAATTGTTGTTAAGTGATGTGAGGTCGGAGCAGGTGTTG
GGAAAGTTGGTCTTGGCCTTGACGCCCCGAAACTCGAGGGCGGCGGCGTCATAGGCACGCGCAGCCTCCTCGGCGGTGTCGAAGGTGCCAAGCCAGACGC
GGGTCTTCTTGCCCGGGTCACGGATCTCGGCGGCGTACCGTCCCCATGGCCGCTTTCGCACGCCCCTGAACCGGATCTCCTTCGAGTCCGAGTCCTGGTA
AACGATATCTGATCCGTTTCTCGGAGCCATTAGAGTTTCCGTTGGGAGTAAGTTAGGTATGTAGGGGAATAATGAAAGTTTGGAAAGGGCAGAGGTTGTC
GGACACAATCGACGCTTGATAAAAGAGAGGATGCAGGTGGGATTTTATAGAGAGGAGGGGCGCAAAGGCAAAGTGGCATAAGAGAGATTAAAAGCTACGC
TCCTTTTCGGGCGCTTGTTGTGTACAGTCTAAGCAGGACGTGGCTTCTCTACCACGATCCACTTTGCCAACTTGTGTCAAACGTTCTCATGTTTTTGCCA
TTTCAATAAATATTTATTTAGGTTAAAAATAAATCGGTTTTTTTTTTTTTTCGTAAAAAGAGTGTTATAGTCGCGGGTCATAAAGAAATTTATAAAAATA
TATTTATATAATATATTAGATTTATTTTATAATAAAA