Detailed information on CNT30515901


BLAST search results

BLAST vs Swiss-Prot:
sp|P46256|ALF1_PEA, E-value = 2e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30670509Juglans regiaSetaria viridis23.3344.1280150forward
CNT30437501Juglans regiaAegilops tauschii20.0635.1580.62129forward
CNT30458863Juglans regiaSaccharum spontaneum24.2611.1780.13156forward
CNT30683148Juglans regiaTriticum urartu20.0623.9380.62129forward
CNT30359088Juglans regiaLactuca sativa36.734.9679.24236forward

Expression of CNT30515901

Peptides detected in this lncRNA

>peptide 1 (73 aa)
MTPERRERALGEVKRSSRRAWRLDSMFSTLMLARRLPMVPVLSSAAKMPFPGVAMYLAFLISSSACMHACARS*

>peptide 2 (32 aa)
MSQAGQLDCALVYFDTWNDIVFLKDFNERLSI*

>peptide 3 (32 aa)
MHAQDHEIKPYIICKLHTQVAKNVNNRSWKES*

Sequence

>CNT30515901
ACCAAAAGTAATAAAATTAGCACATGATGAGTAATTAAATAAAGAGGGAACAGACAGATCAGGAAGATTCATGAGTCAGGCAGGCCAGCTCGACTGTGCC
CTTGTCTACTTTGATACCTGGAACGACATTGTTTTCTTGAAGGACTTCAACGAAAGGCTTTCCATCTGAGGTTTTTTGGTAGAGGGTCTCCTCGAAGAGT
ATGACACCAGAGAGGCGGGAGAGGGCATTGGGGGAGGTGAAGAGGAGCTCGCGCAGGGCTTGGCGGTTGGATTCAATGTTCTCCACGTTAATGCTGGCTA
GACGCTTGCCAATGGTCCCGGTGCTCTCGTCAGCAGCCAAAATGCCCTTCCCAGGGGTGGCAATGTACCTGGCATTCTTGATAAGCTCCTCTGCATGCAT
GCATGCATGCGCAAGATCATGAAATTAAACCATATATAATTTGCAAACTCCACACACAAGTTGCAAAGAATGTAAACAACAGAAGTTGGAAAGAATCTTA
ATTTGCTGCAAATCAGCTACTTCTAATTTCTCGATTGCAGTAGATTTAATTCTTTTGTGAGAAGGCAACTTCTGGTTGTTAATTTGATGGCCCATGCATG
GCTCATCAAATAGAGAGTCAAGAGAGAGAGAGAAGAATACCTG