Detailed information on CNT30515782


BLAST search results

BLAST vs Swiss-Prot:
sp|P93604|LRK10_WHEAT, E-value = 4e-95

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316325Juglans regiaCorylus avellana81.4655.6681.391037forward
CNT30701990Juglans regiaQuercus lobata39.9186.9980.31508forward
CNT30710978Juglans regiaGlycine max10.5349.0881.34134forward
CNT30171019Juglans regiaTrifolium pratense10.7640.2981.75137forward
CNT30143980Juglans regiaMedicago truncatula8.5627.8882.57109forward
CNT30129184Juglans regiaCorymbia citriodora7.7830.8482.8399forward
CNT30573477Juglans regiaVitis vinifera20.2716.5379.84258forward
CNT30109318Juglans regiaOryza longistaminata4.8723.9488.7162forward
CNT3024212Juglans regiaPopulus trichocarpa11.3922.8786.21145forward

Expression of CNT30515782

Peptides detected in this lncRNA

>peptide 1 (80 aa)
MHASSFSCSPFPSIAFQSYTHQLCMKRLQYFCKAFQEPCIQTFLLHESKERYYLPPGTILLSQNLKLWVSNFHQEECCEA*

>peptide 2 (45 aa)
MTFIIDGRSLGFNCMHHNATIIIFLHSFLSSPVASSISIFFPSWN*

>peptide 3 (98 aa)
MNTKTNELHYIHMMDPSNGCYFTDKILSICFGLANIFTATRRPLRSVPLNTVPNPPSPNLSLKPLVIFLISEKEYLIGMKLFWLCRNSSTSLYMDKCLL

>peptide 4 (40 aa)
MYPNVPLARVKGTILSSTGYNFAKPKSETLGFKFSSRRML*

>peptide 5 (31 aa)
MVATSLIKSCPFALDWLTSLLLQDVHFEVFL*

Sequence

>CNT30515782
AGAGAGAGAGATGTGTAAAAAATTTATACATGGATGAGTAGCATCAAACTATATTTAGATTGATACTTATTTTTAGGGCACTGCAAAGTATATATACTAC
AACAAGCATAGAAAGATAATTACCTTAAATTGTCGATCTTTTCTTTTTTCGTGGGCTTGAAGCAAACTTCTCTTAAAAAAGGATAAAAAGAGATAGTTCA
ATTTTAGAAAGACAAACAATAAAAATTAAGCAAGGCTTGATTCATCTGATTGAATTGATGATGAAGCTTGATTTGAATTATCTCTAGCACCCTTTATCTC
TCTCTTTGGTGATGGTTGGAGAGGCTTGAGAGGAACTTGTAAGCATTCAACATCTCCTTCAAGCATTTTGATGACTTTCATCATTGATGGACGATCGCTA
GGCTTCAATTGTATGCACCATAATGCAACTATCATCATCTTCTTACATAGTTTTCTTTCATCTCCAGTAGCATCTTCAATTTCTATATTCTTTCCATCAT
GGAATTGATCATATATCCAAGTGGGGAAGTAAATTTGGCTTAAATGTTCTGTAGATGCATGCAAGTTCTTTCTCCTGCTCACCATTTCCATCAATAGCAT
TCCAAAGCTATACACATCAGCTTTGTATGAAACGCCTCCAATATTTTTGTAAAGCATTTCAGGAGCCATGTATCCAAACGTTCCTCTTGCACGAGTCAAA
GGAACGATACTATCTTCCACCGGGTACAATTTTGCTAAGCCAAAATCTGAAACTTTGGGTTTCAAATTTTCATCAAGAAGAATGTTGTGAGGCTTAATGT
CAAAATGTAAAATTTGCATGTCACATCCTTGATGTAAATACTCAATCCCGCGAGCCACTCCTAAAGCAATATCATATGTTTTCTCGTAGTTGAGGATATT
TGCCTCTGATGAAAAAATGTGTTTGTTTAGAGATCCGTTGGGCATGAACTCATATATAAGGGCACGCTTTGAACCATGAACACAAAAACCAACGAGTTGC
ACTATATTCACATGATGGATCCTTCCAATGGTTGCTACTTCACTGATAAAATCTTGTCCATTTGCTTTGGATTGGCTAACATCTTTACTGCTACAAGACG
TCCACTTCGAAGTGTTCCTTTAAATACTGTGCCAAATCCTCCTTCACCCAATCTTTCCCTAAAACCTTTGGTCATTTTCTTAATTTCTGAGAAAGAGTAC
CTTATTGGCATGAAGTTATTTTGGCTTTGCAGAAATTCCTCAACATCATTGTACATGGATAAGTGCCTCCTTC