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Detailed information on CNT30515591


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523223Juglans regiaSetaria italica24.6625.782.81128forward
CNT30617555Juglans regiaSesamum indicum24.6621.2684.38128forward
CNT30710175Juglans regiaGlycine max23.5130.8181.97122forward
CNT30290105Juglans regiaTriticum aestivum26.7830.6281.29139forward
CNT30387749Juglans regiaTriticum turgidum26.9721.9881.43140forward
CNT30659185Juglans regiaTriticum dicoccoides26.9726.2781.43140forward
CNT30134237Juglans regiaLolium perenne26.9722.2680.71140forward
CNT30620908Juglans regiaCajanus cajan22.9316.7683.19119forward

Expression of CNT30515591

Peptides detected in this lncRNA

>peptide 1 (70 aa)
MPQCTPRLLGRTCMRPAPNWVDLFQGWPSQGSLMVWALFGVSAALAETLGLERFRTAMAAAIVVVSSFLG*

>peptide 2 (43 aa)
MHSPLAGSDVHATRSELGRPLPRVAEPGELDGLGALWCVCCLG*

>peptide 3 (45 aa)
MASSRAQLLHLVPCRNALPACWVGRACDPLRTGSTSSKGGRARGA*

Sequence

>CNT30515591
CATGCATGATATGGTAAAGAAAAGCAACAGATGATAAGATTCATGATCATAAATATTAATCCACATGTCTAATTCCATCCATAAATAACAATAATAATAA
TAATATATAAAATCCAAACATCTGATAAAAGTCATCGATCGTTACTAGCTAAAATAACCAGTTGATCAGTACTCAGTCTTCATAGGTACGGCACTCGTCG
GTCTCCGGGTTGTCCTTACAGTAAGTCTCCAGGGGGTCTGCCTCTTTCTTCCTGTCCCGTGCATGGCTAGCAGCCGCGCTCAGCTCCTCCACCTCGTCCC
ATGCCGCAATGCACTCCCCGCTTGCTGGGTCGGACGTGCATGCGACCCGCTCCGAACTGGGTCGACCTCTTCCAAGGGTGGCCGAGCCAGGGGAGCTTGA
TGGTCTGGGCGCTCTTTGGTGTGTCTGCTGCCTTGGCTGAGACCCTAGGGCTCGAGAGGTTTAGAACGGCTATGGCTGCTGCCATTGTTGTTGTTTCGAG
TTTTCTTGGGTGAAATGGG