Detailed information on CNT30515464


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 7e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678303Juglans regiaSetaria viridis12.739.6182.27141forward
CNT30522020Juglans regiaSetaria italica12.729.7582.27141forward
CNT30630888Juglans regiaVigna unguiculata23.4238.483.85260forward
CNT30145736Juglans regiaMedicago truncatula13.6920.4685.53152forward
CNT30228866Juglans regiaAnanas comosus19.9125.2981.45221forward
CNT30651207Juglans regiaRosa chinensis21.3535.0188.61237forward
CNT30596794Juglans regiaOryza meridionalis21.3535.7580.59237forward
CNT30570681Juglans regiaVitis vinifera25.0520.3486.33278forward
CNT30499040Juglans regiaDigitaria exilis17.8429.1279.8198forward
CNT30174623Juglans regiaVigna angularis23.5130.6385.06261forward
CNT30724196Juglans regiaLupinus angustifolius21.0828.1285.9234forward

Expression of CNT30515464

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MHLLLHSIGSWALRVEQQAAIVDCLLGQGFQH*

>peptide 2 (35 aa)
MKVVQTLTTYSHVNNKYITNNIRIQHLTSHTLACR*

>peptide 3 (59 aa)
MATSAAGENRRGSAWVQLRWSESHRSFLGGCLGGFPSSCLDCALGDREFKLLGTGEGEG*

>peptide 4 (55 aa)
LHSTQLSSFLSELSRLSLFSFLFRVYLKLSHGTSIYRRGSISFICMNAFIVAFNR*

Sequence

>CNT30515464
CTCCACTCAACTCAACTCTCTTCTTTTCTCTCAGAGCTCTCTCGGCTCTCTCTCTTTTCTTTTCTCTTTAGGGTGTATCTGAAACTCTCGCATGGAACTT
CAATTTATAGGCGAGGATCAATATCGTTTATATGTATGAATGCATTTATTGTTGCATTCAATAGGTAGTTGGGCGCTGAGGGTTGAGCAGCAAGCAGCCA
TTGTGGATTGCTTGCTTGGGCAGGGATTTCAACATTGAGTTCATCGATCTGGTCCTATTTTTTCAAAGGAAAATCTCATTTCAATTCAATTTTCATTAGA
GTCTTCAGATGTCACATTAATTCTAGGTTGTTTTTCAGGTACTGATATATCTAAGCTAATTAACAGCATAAACAAACAATAATACAACATATACCCTTTT
GATGTAGCAACTTGGGAAAAACAAAATGAAGGTGGTTCAAACATTAACAACGTACAGTCACGTAAATAATAAATACATAACAAACAACATAAGAATCCAA
CACCTCACAAGTCATACACTTGCTTGCCGGTGAACTTGACCTCGATCGGGTTCACATTCTTTCCAATTGACCTGAAGTTCACTCCGACACCTTGACGGCC
GGGGTTCACCTTCTCAGGGTAGACACCGTCCTTTGGGTGCAAATATTGGACCTCTCCATTTGGGAACACCCTGTAAAACTGGTACTTGATCTTGTACTTA
GACCTCAGCCTAGTCCCCAGAGCCAAGCACTGCTCCTTCCTGGCCAGTTTGAGCAGGTTAGGACCCTGCCTCATAATGGCCACCAGTGCTGCCGGCGAAA
ATCGGCGAGGGAGTGCTTGGGTCCAACTCAGGTGGAGTGAATCCCACCGGAGCTTCCTTGGTGGGTGCCTCGGCGGCTTCCCCAGCAGCTGCCTTGATTG
TGCGCTGGGAGACAGAGAATTTAAGTTGCTTGGGACTGGTGAAGGAGAGGGTTGAGGATTGTTTCCATGGCACGGTGACACGGTCCCCGGACTTTGAGGC
CGAGAGGGGAGGGGTGAAGAGGGAGGCTTGGGTTGCCATGGCCATGAAGGGCTAGAGATAAGGGGATGATGGTTGGTGCAAGCTGCTTGATAACGGGGAT
GATGGTTGTG