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Detailed information on CNT30515355


BLAST search results

BLAST vs Swiss-Prot:
sp|P12360|CB11_SOLLC, E-value = 7e-65

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30525458Juglans regiaPhaseolus vulgaris34.4711.6987.74212forward
CNT30629575Juglans regiaVigna unguiculata27.6441.4685.88170forward
CNT30708472Juglans regiaGlycine max21.4630.8484.09132forward
CNT30400439Juglans regiaTriticum turgidum16.5938.4982.35102forward
CNT30567058Juglans regiaActinidia chinensis20.1634.4487.1124forward
CNT30588696Juglans regiaMusa acuminata24.8856.8884.31153forward
CNT30171605Juglans regiaTrifolium pratense25.212.3785.16155forward
CNT30254921Juglans regiaAvena sativa12.8533.0586.0879forward
CNT3010282Juglans regiaZea mays20.8122.6581.25128forward
CNT30609040Juglans regiaGossypium raimondii39.3552.6182.23242forward
CNT30346386Juglans regiaEragrostis tef34.1530.0979.52210forward
CNT3034379Juglans regiaTheobroma cacao33.0126.0384.73203forward
CNT3058384Juglans regiaAmborella trichopoda33.9843.8279.9209forward
CNT3037560Juglans regiaCucumis melo31.0618.2185.86191forward
CNT30102128Juglans regiaOryza rufipogon30.8932.8281.05190forward
CNT30576871Juglans regiaOryza barthii30.8922.0981.05190forward
CNT30580151Juglans regiaEchinochloa crusgalli29.1133.9782.12179forward
CNT30497042Juglans regiaDigitaria exilis41.1431.8281.03253forward
CNT30551236Juglans regiaOryza brachyantha43.2526.7380.08266forward

Expression of CNT30515355

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MALGSPSRWLDLRERQPTPEPSPSSPTPM

>peptide 2 (52 aa)
DRDSLIQAHVTWTFTVRSIIKISMLQGENDLGIRISPMLLCHGSAKWVARVS*

Sequence

>CNT30515355
GATCGAGATTCATTAATACAGGCTCATGTTACATGGACTTTTACAGTGAGAAGTATAATTAAAATTTCCATGCTTCAGGGGGAAAATGATTTGGGAATAA
GGATTTCCCCAATGTTGTTGTGCCATGGATCAGCCAAGTGGGTGGCCAGGGTAAGCTGATTGTTGAACGCAGAATCCCACAAAAGCCAACAGAGCAAGCC
GGCCTGCGCGCATAATATCACTCATACAATCAATATCCCAGACTCTATGTAGGTAGATGGTTAATTATAAGAATGTAACAGTTGTTTACAATAAATGAAC
ATGGAAATTATATATTAGGGAGTACGAGATCGATCTGGGCGCTAACCGTTTTTTATCTCCTTGACTTTGTATTCCTTGAACTTTTCGGGGTCCTTAGAGT
AGCCCAAGGGATCAAAAGCACCGCCAGGATACTTCTTCTTCTCCGGATCTTTCTCCATGCTGCGTTGGTGCTCCACAAAGGAAATGGCGAGGAATTCAAT
GACCAAGATGGTAGGGAGAGTGCCCCATGGCACTGGGTAGCCCAAGTAGGTGGCTTGACCTCCGGGAACGGCAGCCCACTCCTGAGCCTTCACCCAGTTC
CCCAACCCCAATGCC