Detailed information on CNT30515314


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FIC8|GL116_ARATH, E-value = 9e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3019818Juglans regiaCitrullus lanatus23.3752.0382.47154forward
CNT30382100Juglans regiaManihot esculenta39.7651.7879.01262forward
CNT30631662Juglans regiaVigna unguiculata45.6843.3179.4301forward
CNT3090155Juglans regiaSolanum tuberosum26.8622.1579.66177forward
CNT30573105Juglans regiaVitis vinifera35.9639.1783.54237forward
CNT30706384Juglans regiaPrunus avium59.3361.3882.1391forward
CNT3027612Juglans regiaPopulus trichocarpa28.5311.0781.38188forward
CNT30726724Juglans regiaLupinus angustifolius19.422782.03128forward

Expression of CNT30515314

Peptides detected in this lncRNA

>peptide 1 (69 aa)
MTTRNSVPRGWVWGGFKPRGAKSMRAKDMPRVLRPGSCSTVTAVTFDPTLFEVFPGMFTERKKSSAVTSF

>peptide 2 (37 aa)
MGGLDPKTALAMVITPGFWLLRPANATALVFPTFNWK*

>peptide 3 (31 aa)
MRPIGNTKTSPLFRTLVKRRLPSALDVTKPT*

Sequence

>CNT30515314
CAAAGAGACTGTAAATTATAAGCAACAATTTTATTTCAATAAAATAATTTCAATGAGGTTACAAGCTGGGAAACATTGACAAACTTAATCACACCATCTA
ATGGTTTATTGCAAATATATCTTGAAATCTATGATTTTAGTTTAGGCAATTAGTTAGAACTGTTGCTGAAGATAGTTAACCAGATTCTTGTCCACTTGGA
AGGCCTTGGTGAGAACATCTTGATTGATGGGAGGATTGGATCCAAAGACTGCATTGGCTATGGTAATAACCCCAGGATTTTGGCTGCTCAGACCAGCAAA
TGCAACCGCCTTGGTATTTCCCACGTTCAACTGGAAGTGAATGAGACCAATTGGGAACACAAAGACGTCTCCCTTGTTTAGAACTTTGGTGAAGAGGCGG
TTACCGTCTGCATTGGATGTGACAAAGCCAACATGAAGAGTACCTTCTATGACTACAAGAAACTCAGTGCCACGAGGGTGGGTGTGGGGAGGATTTAAGC
CACGTGGTGCAAAGTCGATGCGAGCCAAGGATATGCCTAGGGTGTTGAGGCCTGGTAGTTGTTCCACAGTCACAGCAGTGACATTCGACCCCACTTTATT
TGAGGTGTTTCCAGGAATGTTTACTGAGCGGAAGAAATCATCAGCAGTGACAAGCTTTG