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Detailed information on CNT30515171


BLAST search results

BLAST vs Swiss-Prot:
sp|P26587|TIP31_ARATH, E-value = 1e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523825Juglans regiaSetaria italica11.5534.4981.65109forward
CNT30316259Juglans regiaCorylus avellana14.6243.2684.78138forward
CNT30549105Juglans regiaIpomoea triloba14.6224.2581.88138forward
CNT3020673Juglans regiaCitrullus lanatus21.41980.69202forward
CNT30728378Juglans regiaCorchorus capsularis25.5319.1782.99241forward
CNT30163276Juglans regiaPistacia vera10.2831.4987.6397forward
CNT30224613Juglans regiaHordeum vulgare11.1238.7584.76105forward
CNT30560769Juglans regiaActinidia chinensis14.6220.683.33138forward
CNT30590722Juglans regiaMusa acuminata14.9432.0582.98141forward
CNT3085716Juglans regiaVigna radiata19.660.0679.46185forward
CNT30541063Juglans regiaBrassica napus24.5829.2279.31232forward
CNT3079106Juglans regiaBrassica juncea6.6723.610063reverse complement
CNT30609232Juglans regiaGossypium raimondii25.7445.7683.54243forward
CNT30227805Juglans regiaAnanas comosus19.3938.4582.51183forward
CNT30646773Juglans regiaRosa chinensis23.4159.8979.64221forward
CNT30214058Juglans regiaHelianthus annuus7.8428.0310074forward
CNT30712987Juglans regiaMalus domestica golden11.0229.1385.58104forward
CNT30623024Juglans regiaDaucus carota8.925.2389.2984forward
CNT30364641Juglans regiaSorghum bicolor22.7827.7879.07215forward
CNT30595794Juglans regiaOryza meridionalis9.4340.6484.2789forward
CNT30706529Juglans regiaPrunus avium24.8915.2886.38235forward
CNT3024898Juglans regiaPopulus trichocarpa23.4142.6681.45221forward
CNT30318685Juglans regiaAsparagus officinalis9.1121.3484.8886forward
CNT30116468Juglans regiaOryza nivara19.4925.9280.43184forward
CNT30112244Juglans regiaFicus carica21.430.6183.66202forward
CNT3050352Juglans regiaCucumis sativus19.2824.882.97182forward

Expression of CNT30515171

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MALITTWWYRAASAAPMNENSVYKNEGTNNFSA*

Sequence

>CNT30515171
AAGCGTCACTAGCTTCACTTTGACTTGAAGGGAATGGCTCTGATCACAACCTGGTGGTATAGAGCTGCGAGTGCTGCCCCAATGAATGAAAACAGTGTAT
ACAAGAACGAAGGTACCAACAATTTCAGCGCCTAGGCCATCACCTTTGGTGTAACCAGGGGCCACAAAGTTGGCCCCACCATTCAACCTTACGTACTCGC
CCTTCAAGAACCCCCTCACAACACCAGCACCACAGATGGCACCTAGGCACTGCATCACCATGTAGAACAACGCCCTCGTCAGCGACAGCTTCCTCGCCAG
AAAAAGCCCGAACGTTACGGCTGGATTTATGTGACCTCCTGCCGCAATTAAAAACCACAATAAAATCAAATAATTTATGCAGCCAAAATAAGAATATGAG
CCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCACGGTGGGCGCTGTTTTTGTTTTCCAGCACCGGGATCC
GGATCTCAGTCCCATTTAGATTTTATAAGGCAAAGAAAAATAACTGTAAAAATACAGCCGCATAATGTCGAACCTGAGATGCCAGCGCGATCCCTTGGAT
ACCGACATTTGCGCACTTATTTTTACCTAGGTCGACTGGCTTAACAACGCCCATCACCGTCAAAATCGTGATGTACAGAAACAGGAAGGTCGCGACGAAC
TCGGCAATCCCAGCCCTGTAAAAAGACCAAGAGCTCAGCTCCCCAGGCTCAAACAGTGGAGCCGGTGGCGGCTCCGTGTAGTCCTTGCCATCGTCCTGGC
TCTGAGCAGCAGTCCCGATAGGTTGCCTCTCCGGGAACTTGTTGGCTCCCAATCTAACATCCTCTTCTTTACCCTCCATTTCAGCCCCGACTCCAAAGCT
TTAGCAACAAACAAGTTGATTAGTGAGTGATCGTTTGATCTTCT