Detailed information on CNT30515168


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FIC9|GL115_ARATH, E-value = 2e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3045720Juglans regiaPrunus dulcis64.1446.584.59279forward
CNT3090146Juglans regiaSolanum tuberosum30.1117.0881.68131forward
CNT30155140Juglans regiaPrunus persica34.0247.7487.84148forward

Expression of CNT30515168

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MRPIGNTNTSPLFRTLVKRRLPSALDVTKPT

>peptide 2 (37 aa)
MGGLDPKTALAMVMTPGFWLLRPAKATALVFPTFNWK*

Sequence

>CNT30515168
CAAAGAGACTGTAAATTATAAGCAACAATTTTATTTCAATAAAATAATTTCAATGAGGTTACAAGCTGGGAAACATTGACAAACTTAATCACACCATCTA
ATGGTTTATTGCAAATATATCTTGAAATCTATGATTTTAGTTTAGGCAATTAGTTAGAACTGTTGCTGAAGATAGTTAACCAGATTCTTGTCCACTTGGA
AGGCCTTGGTGAGAACATCTTGATTGATGGGAGGATTGGATCCAAAGACTGCATTGGCTATGGTGATGACCCCAGGATTCTGGCTGCTCAGACCAGCAAA
GGCAACCGCCTTGGTATTTCCCACGTTCAACTGGAAGTGAATGAGACCAATTGGGAACACAAACACGTCTCCCTTGTTTAGAACTTTGGTGAAGAGGCGG
TTGCCATCTGCATTGGATGTGACAAAGCCAACATG